{ "type": "genome", "identifier": "GCA_016869375.1", "organism": "Alphaproteobacteria bacterium", "title": "Alphaproteobacteria bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Wisconsin - Madison", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016869375.1", "bioproject": "PRJNA523022", "biosample": "SAMN10966368", "wgs_master": "VGEH00000000.1", "refseq_category": "na", "taxid": "1913988", "species_taxid": "1913988", "organism_name": "Alphaproteobacteria bacterium", "infraspecific_name": "", "isolate": "K_Offshore_80m_m2_051", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/11", "asm_name": "JGI 2017-08-21", "submitter": "University of Wisconsin - Madison", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/869/375/GCA_016869375.1_JGI_2017-08-21", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-11", "dateModified": "2021-02-11", "datePublished": "2021-02-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Alphaproteobacteria bacterium" ], "sample_taxid": [ "1913988" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tanzania: Lake Tanganyika, Kigoma" ], "sample_host_location_id": [], "data_size": "1.364 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 76.04, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", 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1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hypericibacter terrae", "strain": "strain=R5913", "accession": "GCA_008728855.1", "taxid": 2602015, "species_taxid": 2602015, "relation_to_type": "type", "validated": true, "ani": 77.1031, "matched_fragments": 364, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobaculum fulvum", "strain": "strain=KCTC 42651", "accession": "GCA_014652915.1", "taxid": 1633335, "species_taxid": 1633335, "relation_to_type": "type", "validated": true, "ani": 77.0427, "matched_fragments": 434, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum pacificum", "strain": "strain=MCCC 1A02656", "accession": "GCA_001618175.1", "taxid": 580166, "species_taxid": 580166, "relation_to_type": "type", "validated": true, "ani": 76.9828, "matched_fragments": 295, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum picis", "strain": "strain=IMMIB TAR-3", "accession": "GCA_017876115.1", "taxid": 488438, "species_taxid": 488438, "relation_to_type": "type", "validated": true, "ani": 76.9026, "matched_fragments": 336, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Reyranella aquatilis", "strain": "strain=KCTC 52223", "accession": "GCA_020880995.1", "taxid": 2035356, "species_taxid": 2035356, "relation_to_type": "type", "validated": true, "ani": 76.8643, "matched_fragments": 351, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=USBA 355", "accession": "GCA_900177295.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 76.863, "matched_fragments": 487, "total_fragments": 1510, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia 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