{ "tc_result": [ { "organism_name": "Shinella pollutisoli", "strain": "strain=KCTC 52677", "accession": "GCA_024609765.1", "taxid": 2250594, "species_taxid": 2250594, "relation_to_type": "type", "validated": true, "ani": 75.1137, "matched_fragments": 74, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas sangjuensis", "strain": "strain=DSM 28345", "accession": "GCA_010211755.1", "taxid": 1503750, "species_taxid": 1503750, "relation_to_type": "type", "validated": true, "ani": 75.0862, "matched_fragments": 78, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium tengchongense", "strain": "strain=DSM 25623", "accession": "GCA_003814555.1", "taxid": 1273429, "species_taxid": 1273429, "relation_to_type": "type", "validated": true, "ani": 75.0163, "matched_fragments": 107, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas aquatica", "strain": "strain=RIB1-20", "accession": "GCA_022662575.1", "taxid": 450364, "species_taxid": 450364, "relation_to_type": "type", "validated": true, "ani": 75.0102, "matched_fragments": 97, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas koreensis", "strain": "strain=KCTC 12208", "accession": "GCA_010093225.1", "taxid": 266061, "species_taxid": 266061, "relation_to_type": "type", "validated": true, "ani": 75.0071, "matched_fragments": 80, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium tengchongense", "strain": "strain=YIM 77520", "accession": "GCA_008033455.1", "taxid": 1273429, "species_taxid": 1273429, "relation_to_type": "type", "validated": true, "ani": 75.0014, "matched_fragments": 101, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalbus denitrificans", "strain": "strain=DSM 26407", "accession": "GCA_003337735.1", "taxid": 547122, "species_taxid": 547122, "relation_to_type": "type", "validated": true, "ani": 74.9764, "matched_fragments": 59, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000190375.2", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 74.9669, "matched_fragments": 116, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas wenzhouensis", "strain": "strain=YD-1", "accession": "GCA_007859305.1", "taxid": 2599615, "species_taxid": 2599615, "relation_to_type": "type", "validated": true, "ani": 74.9663, "matched_fragments": 98, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tautonia plasticadhaerens", "strain": "strain=ElP", "accession": "GCA_007752535.1", "taxid": 2527974, "species_taxid": 2527974, "relation_to_type": "type", "validated": true, "ani": 74.9647, "matched_fragments": 80, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000420125.1", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 74.9456, "matched_fragments": 126, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plesiocystis pacifica", "strain": "strain=SIR-1", "accession": "GCA_000170895.1", "taxid": 191768, "species_taxid": 191768, "relation_to_type": "type", "validated": true, "ani": 74.929, "matched_fragments": 92, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisphaera giovannonii", "strain": "strain=OJF2", "accession": "GCA_008087625.1", "taxid": 406548, "species_taxid": 406548, "relation_to_type": "type", "validated": true, "ani": 74.9282, "matched_fragments": 90, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_004340905.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 74.9239, "matched_fragments": 157, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_016583525.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 74.9049, "matched_fragments": 151, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Urbifossiella limnaea", "strain": "strain=ETA_A1", "accession": "GCA_007747215.1", "taxid": 2528023, "species_taxid": 2528023, "relation_to_type": "type", "validated": true, "ani": 74.8307, "matched_fragments": 119, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora phaseoli", "strain": "strain=NBRC 110907", "accession": "GCA_016863675.1", "taxid": 1144548, "species_taxid": 1144548, "relation_to_type": "type", "validated": true, "ani": 74.735, "matched_fragments": 80, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora phaseoli", "strain": "strain=CGMCC 4.7038", "accession": "GCA_900109115.1", "taxid": 1144548, "species_taxid": 1144548, "relation_to_type": "type", "validated": true, "ani": 74.7196, "matched_fragments": 85, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora phaseoli", "strain": "strain=DSM 45730", "accession": "GCA_003253475.1", "taxid": 1144548, "species_taxid": 1144548, "relation_to_type": "type", "validated": true, "ani": 74.716, "matched_fragments": 86, "total_fragments": 585, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 63.66, "contamination": 5.56, "strain_heterogeneity": 50.0 }, "gtdb_result": [ { "accession": "GCA_016873405.1", "gtdb_species": "s__CAINDZ01 sp016873405", "ani": 100.0, "matched_fragments": 573, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_016712675.1", "gtdb_species": "s__CAINDZ01 sp016712675", "ani": 86.0864, "matched_fragments": 505, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016703265.1", "gtdb_species": "s__CAINDZ01 sp016703265", "ani": 82.8554, "matched_fragments": 471, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.41", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_903859215.1", "gtdb_species": "s__CAINDZ01 sp903859215", "ani": 82.4172, "matched_fragments": 418, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.58", "min_intra_species_ani": "99.58", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903847545.1", "gtdb_species": "s__CAINDZ01 sp903847545", "ani": 82.3755, "matched_fragments": 346, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.70", "min_intra_species_ani": "98.54", "mean_intra_species_af": "0.79", "min_intra_species_af": "0.77", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_903912525.1", "gtdb_species": "s__CAINDZ01 sp903912525", "ani": 82.0854, "matched_fragments": 444, "total_fragments": 585, "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__LZORAL124-64-63;f__LZORAL124-64-63;g__CAINDZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }