{
    "type": "genome",
    "identifier": "GCA_017430155.1",
    "organism": "Kiritimatiellia bacterium",
    "title": "Kiritimatiellia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Nanjing Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_017430155.1",
        "bioproject": "PRJNA657473",
        "biosample": "SAMN16343099",
        "wgs_master": "JAFRNO000000000.1",
        "refseq_category": "na",
        "taxid": "2212473",
        "species_taxid": "2212473",
        "organism_name": "Kiritimatiellia bacterium",
        "infraspecific_name": "",
        "isolate": "RGIG2632",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/19",
        "asm_name": "ASM1743015v1",
        "submitter": "Nanjing Agricultural University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/430/155/GCA_017430155.1_ASM1743015v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-19",
    "dateModified": "2021-03-19",
    "datePublished": "2021-03-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Kiritimatiellia bacterium"
        ],
        "sample_taxid": [
            "2212473"
        ],
        "sample_host_organism": [
            "goat"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "1.082 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 79.63,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3875608",
        "Number of Sequences": "778",
        "Longest Sequences (bp)": "26526",
        "N50 (bp)": "5297",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.8",
        "Number of CDSs": "2098",
        "Average Protein Length": "381.5",
        "Coding Ratio (%)": "62.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Agrococcus jejuensis",
                "strain": "strain=DSM 22002",
                "accession": "GCA_900099705.1",
                "taxid": 399736,
                "species_taxid": 399736,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8704,
                "matched_fragments": 61,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Motilibacter deserti",
                "strain": "strain=E257",
                "accession": "GCA_011250635.1",
                "taxid": 2714956,
                "species_taxid": 2714956,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7855,
                "matched_fragments": 52,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gelida",
                "strain": "strain=JCM 1490",
                "accession": "GCA_014647015.1",
                "taxid": 1712,
                "species_taxid": 1712,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.749,
                "matched_fragments": 62,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gelida",
                "strain": "strain=NBRC 3748",
                "accession": "GCA_006538725.1",
                "taxid": 1712,
                "species_taxid": 1712,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7481,
                "matched_fragments": 62,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Plasticicumulans lactativorans",
                "strain": "strain=DSM 25287",
                "accession": "GCA_004341245.1",
                "taxid": 1133106,
                "species_taxid": 1133106,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6479,
                "matched_fragments": 56,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysobacter enzymogenes",
                "strain": "strain=ATCC 29487",
                "accession": "GCA_900106525.1",
                "taxid": 69,
                "species_taxid": 69,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 74.6471,
                "matched_fragments": 58,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Saccharothrix variisporea",
                "strain": "strain=DSM 43911",
                "accession": "GCA_003634995.1",
                "taxid": 543527,
                "species_taxid": 543527,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6049,
                "matched_fragments": 57,
                "total_fragments": 902,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 79.63,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_017430155.1",
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                "matched_fragments": 883,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017427485.1",
                "gtdb_species": "s__RUG572 sp017427485",
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                "matched_fragments": 721,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900320225.1",
                "gtdb_species": "s__RUG572 sp900320225",
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                "matched_fragments": 617,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.22",
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                "mean_intra_species_af": "0.91",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902802945.1",
                "gtdb_species": "s__RUG572 sp902802945",
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                "matched_fragments": 430,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.75",
                "min_intra_species_ani": "96.49",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902779075.1",
                "gtdb_species": "s__RUG572 sp902779075",
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                "matched_fragments": 422,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902761035.1",
                "gtdb_species": "s__RUG572 sp902761035",
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                "matched_fragments": 433,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902763655.1",
                "gtdb_species": "s__RUG572 sp902763655",
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                "matched_fragments": 503,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902779865.1",
                "gtdb_species": "s__RUG572 sp902779865",
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                "matched_fragments": 342,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.47",
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                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017411125.1",
                "gtdb_species": "s__RUG572 sp017411125",
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                "matched_fragments": 221,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002373695.1",
                "gtdb_species": "s__RUG572 sp002373695",
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                "matched_fragments": 245,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__RUG572",
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            },
            {
                "accession": "GCA_902764415.1",
                "gtdb_species": "s__UBA1067 sp002351765",
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                "matched_fragments": 170,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
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            },
            {
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                "gtdb_species": "s__UBA1067 sp004551905",
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                "matched_fragments": 142,
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_902770045.1",
                "gtdb_species": "s__UBA1067 sp902770045",
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                "matched_fragments": 160,
                "total_fragments": 902,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
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                "status": "-"
            },
            {
                "accession": "GCA_902800055.1",
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                "ani": 78.4713,
                "matched_fragments": 158,
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                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA1067",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Verrucomicrobiota",
        "c__Kiritimatiellia",
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        "f__UBA1067",
        "g__RUG572",
        "s__RUG572 sp017430155"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Kiritimatiellia",
        "o__RFP12",
        "f__UBA1067",
        "g__RUG572",
        "s__RUG572 sp017430155",
        "Bacteria",
        "Verrucomicrobiota",
        "Kiritimatiellia",
        "RFP12",
        "UBA1067",
        "RUG572",
        "RUG572",
        "sp017430155"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}