{
    "type": "genome",
    "identifier": "GCA_017512335.1",
    "organism": "Clostridia bacterium",
    "title": "Clostridia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Nanjing Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_017512335.1",
        "bioproject": "PRJNA657473",
        "biosample": "SAMN16346191",
        "wgs_master": "JAFWGS000000000.1",
        "refseq_category": "na",
        "taxid": "2044939",
        "species_taxid": "2044939",
        "organism_name": "Clostridia bacterium",
        "infraspecific_name": "",
        "isolate": "RGIG5724",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/22",
        "asm_name": "ASM1751233v1",
        "submitter": "Nanjing Agricultural University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/512/335/GCA_017512335.1_ASM1751233v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-22",
    "dateModified": "2021-03-22",
    "datePublished": "2021-03-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridia bacterium"
        ],
        "sample_taxid": [
            "2044939"
        ],
        "sample_host_organism": [
            "sheep"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "0.998 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 71.41,
        "contamination": 19.44,
        "strain_heterogeneity": 63.16,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3572488",
        "Number of Sequences": "623",
        "Longest Sequences (bp)": "33086",
        "N50 (bp)": "7922",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.3",
        "Number of CDSs": "2782",
        "Average Protein Length": "300.7",
        "Coding Ratio (%)": "70.3",
        "Number of rRNAs": "2",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Geodermatophilus telluris",
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                "accession": "GCA_900102745.1",
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                "species_taxid": 1190417,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonospora echinospora",
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                "accession": "GCA_900108175.1",
                "taxid": 1992,
                "species_taxid": 1992,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura parmotrematis",
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                "accession": "GCA_019458805.1",
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                "species_taxid": 2864039,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora yangpuensis",
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                "accession": "GCA_900091615.1",
                "taxid": 683228,
                "species_taxid": 683228,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora rhizosphaerae",
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                "accession": "GCA_900091465.1",
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                "species_taxid": 568872,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6457,
                "matched_fragments": 64,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
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            "strain_heterogeneity": 63.16
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        "gtdb_result": [
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__UBA2862",
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                "min_intra_species_ani": "99.72",
                "mean_intra_species_af": "0.89",
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                "num_clustered_genomes": 2,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__UBA2862",
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                "mean_intra_species_ani": "97.80",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
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                "accession": "GCA_017535865.1",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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    "_genome_taxon": [
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    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
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    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}