{
    "type": "genome",
    "identifier": "GCA_017621355.1",
    "organism": "Elusimicrobiaceae bacterium",
    "title": "Elusimicrobiaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Nanjing Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_017621355.1",
        "bioproject": "PRJNA657473",
        "biosample": "SAMN16349256",
        "wgs_master": "JAGATH000000000.1",
        "refseq_category": "na",
        "taxid": "2735568",
        "species_taxid": "2735568",
        "organism_name": "Elusimicrobiaceae bacterium",
        "infraspecific_name": "",
        "isolate": "RGIG8754",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/29",
        "asm_name": "ASM1762135v1",
        "submitter": "Nanjing Agricultural University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/621/355/GCA_017621355.1_ASM1762135v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-29",
    "dateModified": "2021-03-29",
    "datePublished": "2021-03-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Elusimicrobiaceae bacterium"
        ],
        "sample_taxid": [
            "2735568"
        ],
        "sample_host_organism": [
            "water deer"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not collected"
        ],
        "sample_host_location_id": [],
        "data_size": "0.445 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1574229",
        "Number of Sequences": "259",
        "Longest Sequences (bp)": "30092",
        "N50 (bp)": "7807",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.9",
        "Number of CDSs": "1311",
        "Average Protein Length": "296.1",
        "Coding Ratio (%)": "74.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_910576915.1",
                "gtdb_species": "s__UBA1436 sp910576915",
                "ani": 97.0285,
                "matched_fragments": 356,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.08",
                "min_intra_species_ani": "97.03",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002329395.1",
                "gtdb_species": "s__UBA1436 sp002329395",
                "ani": 82.0568,
                "matched_fragments": 250,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.64",
                "min_intra_species_ani": "98.61",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_002159705.1",
                "gtdb_species": "s__UBA1436 sp002159705",
                "ani": 80.8155,
                "matched_fragments": 224,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002432025.1",
                "gtdb_species": "s__UBA1436 sp002432025",
                "ani": 79.7653,
                "matched_fragments": 209,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.20",
                "min_intra_species_ani": "97.76",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_015062115.1",
                "gtdb_species": "s__UBA1436 sp015062115",
                "ani": 79.2489,
                "matched_fragments": 175,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.51",
                "min_intra_species_ani": "98.51",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902794125.1",
                "gtdb_species": "s__UBA1436 sp902794125",
                "ani": 78.4106,
                "matched_fragments": 130,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900315795.1",
                "gtdb_species": "s__UBA1436 sp900315795",
                "ani": 78.082,
                "matched_fragments": 142,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.45",
                "min_intra_species_ani": "96.90",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002309715.1",
                "gtdb_species": "s__UBA1436 sp002309715",
                "ani": 78.0668,
                "matched_fragments": 109,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902781765.1",
                "gtdb_species": "s__UBA1436 sp902781765",
                "ani": 77.7639,
                "matched_fragments": 91,
                "total_fragments": 378,
                "gtdb_taxonomy": "d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__UBA1436",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 26.0,
        "optimum_tmp": 30.0,
        "optimum_ph": 7.5,
        "genome_size": 1643561.6,
        "gc_content": 40.0,
        "coding_genes": 1525.333,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 45.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Elusimicrobiota",
        "c__Elusimicrobia",
        "o__Elusimicrobiales",
        "f__Elusimicrobiaceae",
        "g__Avelusimicrobium",
        "s__Avelusimicrobium sp910576915"
    ],
    "_genome_taxon": [
        "Elusimicrobiaceae",
        "bacterium",
        "d__Bacteria",
        "p__Elusimicrobiota",
        "c__Elusimicrobia",
        "o__Elusimicrobiales",
        "f__Elusimicrobiaceae",
        "g__Avelusimicrobium",
        "s__Avelusimicrobium sp910576915",
        "Bacteria",
        "Elusimicrobiota",
        "Elusimicrobia",
        "Elusimicrobiales",
        "Elusimicrobiaceae",
        "Avelusimicrobium",
        "Avelusimicrobium",
        "sp910576915"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}