{ "tc_result": [ { "organism_name": "Clostridium fessum", "strain": "strain=SNUG30386", "accession": "GCA_003024715.1", "taxid": 2126740, "species_taxid": 2126740, "relation_to_type": "type", "validated": true, "ani": 77.1999, "matched_fragments": 108, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lachnoclostridium edouardi", "strain": "strain=Marseille-P3397", "accession": "GCA_900240245.1", "taxid": 1926283, "species_taxid": 1926283, "relation_to_type": "type", "validated": true, "ani": 76.9683, "matched_fragments": 77, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster asparagiformis", "strain": "strain=DSM 15981", "accession": "GCA_025149125.1", "taxid": 333367, "species_taxid": 333367, "relation_to_type": "type", "validated": true, "ani": 76.5514, "matched_fragments": 100, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hungatella effluvii", "strain": "strain=DSM 24995", "accession": "GCA_003201875.1", "taxid": 1096246, "species_taxid": 1096246, "relation_to_type": "type", "validated": true, "ani": 76.4208, "matched_fragments": 86, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster bolteae", "strain": "strain=ATCC BAA-613", "accession": "GCA_002234575.2", "taxid": 208479, "species_taxid": 208479, "relation_to_type": "type", "validated": true, "ani": 76.3791, "matched_fragments": 102, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster bolteae", "strain": "strain=ATCC BAA-613", "accession": "GCA_002959675.1", "taxid": 208479, "species_taxid": 208479, "relation_to_type": "type", "validated": true, "ani": 76.3791, "matched_fragments": 102, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster bolteae", "strain": "strain=ATCC BAA-613", "accession": "GCA_000154365.1", "taxid": 208479, "species_taxid": 208479, "relation_to_type": "type", "validated": true, "ani": 76.3761, "matched_fragments": 97, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster asparagiformis", "strain": "strain=DSM 15981", "accession": "GCA_000158075.1", "taxid": 333367, "species_taxid": 333367, "relation_to_type": "type", "validated": true, "ani": 76.3562, "matched_fragments": 99, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia producta", "strain": "strain=ATCC 27340", "accession": "GCA_000373885.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 76.0065, "matched_fragments": 56, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium porci", "strain": "strain=WCA-389-WT-23D1", "accession": "GCA_009696375.1", "taxid": 2605778, "species_taxid": 2605778, "relation_to_type": "type", "validated": true, "ani": 76.005, "matched_fragments": 71, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia producta", "strain": "strain=DSM 2950", "accession": "GCA_000439125.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 75.9897, "matched_fragments": 56, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia producta", "strain": "strain=DSM 2950", "accession": "GCA_014131715.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 75.9366, "matched_fragments": 59, "total_fragments": 761, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 66.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002160535.1", "gtdb_species": "s__Clostridium_Q saccharolyticum_A", "ani": 99.1236, "matched_fragments": 744, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.46", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.84", "num_clustered_genomes": 10, "status": "conclusive" }, { "accession": "GCA_018223375.1", "gtdb_species": "s__Clostridium_Q sp000435655", "ani": 80.089, "matched_fragments": 402, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.36", "min_intra_species_ani": "96.90", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.85", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_018377235.1", "gtdb_species": "s__Clostridium_Q sp018377235", "ani": 79.5127, "matched_fragments": 363, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002160755.1", "gtdb_species": "s__Lachnoclostridium_A sp002160755", "ani": 77.3349, "matched_fragments": 134, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoclostridium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.32", "min_intra_species_ani": "98.32", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_016302185.1", "gtdb_species": "s__Clostridium_Q sp016302185", "ani": 77.3104, "matched_fragments": 112, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019114845.1", "gtdb_species": "s__Lachnoclostridium_A stercoripullorum", "ani": 77.108, "matched_fragments": 113, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoclostridium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.44", "min_intra_species_ani": "98.44", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.80", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900626075.1", "gtdb_species": "s__Clostridium_Q transplantifaecale", "ani": 76.9584, "matched_fragments": 160, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900547735.1", "gtdb_species": "s__Clostridium_Q sp900547735", "ani": 76.9535, "matched_fragments": 155, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_Q", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018223415.1", "gtdb_species": "s__Copromonas sp900541255", "ani": 76.8646, "matched_fragments": 117, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Copromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.81", "min_intra_species_ani": "99.68", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_003478355.1", "gtdb_species": "s__UBA3402 sp003478355", "ani": 76.6743, "matched_fragments": 67, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA3402", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.92", "min_intra_species_ani": "96.21", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.69", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_910588865.1", "gtdb_species": "s__UBA3402 sp910588865", "ani": 76.6131, "matched_fragments": 74, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA3402", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019119575.1", "gtdb_species": "s__Enterocloster excrementipullorum", "ani": 76.5298, "matched_fragments": 88, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.43", "min_intra_species_ani": "99.23", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_910577935.1", "gtdb_species": "s__UBA3402 sp910577935", "ani": 76.4888, "matched_fragments": 89, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA3402", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902364025.1", "gtdb_species": "s__Enterocloster lavalensis", "ani": 76.4503, "matched_fragments": 104, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "98.12", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.83", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_019118585.1", "gtdb_species": "s__Enterocloster faecavium", "ani": 76.4451, "matched_fragments": 89, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.87", "min_intra_species_ani": "99.87", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003201875.1", "gtdb_species": "s__Hungatella effluvii", "ani": 76.4208, "matched_fragments": 86, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Hungatella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.81", "min_intra_species_ani": "95.49", "mean_intra_species_af": "0.78", "min_intra_species_af": "0.75", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCA_900551225.1", "gtdb_species": "s__Enterocloster sp900551225", "ani": 76.1682, "matched_fragments": 94, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000155435.1", "gtdb_species": "s__Enterocloster sp000155435", "ani": 76.134, "matched_fragments": 95, "total_fragments": 761, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.08", "min_intra_species_ani": "98.70", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.83", "num_clustered_genomes": 5, "status": "-" } ] }