{
    "type": "genome",
    "identifier": "GCA_017983755.1",
    "organism": "Azonexus sp.",
    "title": "Azonexus sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_017983755.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18119787",
        "wgs_master": "JAGOAU000000000.1",
        "refseq_category": "na",
        "taxid": "1872668",
        "species_taxid": "1872668",
        "organism_name": "Azonexus sp.",
        "infraspecific_name": "",
        "isolate": "Go_SlAct_bin_363",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/15",
        "asm_name": "ASM1798375v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/983/755/GCA_017983755.1_ASM1798375v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-15",
    "dateModified": "2021-04-15",
    "datePublished": "2021-04-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Azonexus sp."
        ],
        "sample_taxid": [
            "1872668"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Goettingen"
        ],
        "sample_host_location_id": [],
        "data_size": "0.697 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 41.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2515346",
        "Number of Sequences": "43",
        "Longest Sequences (bp)": "309571",
        "N50 (bp)": "128337",
        "Gap Ratio (%)": "0.003976",
        "GCcontent (%)": "64.0",
        "Number of CDSs": "2468",
        "Average Protein Length": "311.1",
        "Coding Ratio (%)": "91.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Dechloromonas denitrificans",
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                "accession": "GCA_001551835.1",
                "taxid": 281362,
                "species_taxid": 281362,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.5967,
                "matched_fragments": 569,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dechloromonas hortensis",
                "strain": "strain=MA-1",
                "accession": "GCA_009469765.1",
                "taxid": 337779,
                "species_taxid": 337779,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.4521,
                "matched_fragments": 570,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azonexus fungiphilus",
                "strain": "strain=DSM 23841",
                "accession": "GCA_003634965.1",
                "taxid": 146940,
                "species_taxid": 146940,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.1,
                "matched_fragments": 489,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azonexus hydrophilus",
                "strain": "strain=DSM 23864",
                "accession": "GCA_000429605.1",
                "taxid": 418702,
                "species_taxid": 418702,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.6874,
                "matched_fragments": 455,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodocyclus purpureus",
                "strain": "strain=DSM 168",
                "accession": "GCA_016653115.1",
                "taxid": 1067,
                "species_taxid": 1067,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2447,
                "matched_fragments": 312,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodocyclus gracilis",
                "strain": "strain=DSM 110",
                "accession": "GCA_009617575.1",
                "taxid": 2929842,
                "species_taxid": 2929842,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5154,
                "matched_fragments": 244,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aromatoleum toluvorans",
                "strain": "strain=Td21",
                "accession": "GCA_012910905.1",
                "taxid": 92002,
                "species_taxid": 92002,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0659,
                "matched_fragments": 299,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aromatoleum toluclasticum",
                "strain": "strain=MF63",
                "accession": "GCA_000378245.1",
                "taxid": 92003,
                "species_taxid": 92003,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9072,
                "matched_fragments": 296,
                "total_fragments": 819,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 41.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_017983755.1",
                "gtdb_species": "s__Azonexus sp017983755",
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                "matched_fragments": 817,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002440665.1",
                "gtdb_species": "s__Azonexus sp002440665",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009469615.1",
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                "matched_fragments": 695,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013363835.1",
                "gtdb_species": "s__Azonexus sp013363835",
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                "matched_fragments": 603,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016790845.1",
                "gtdb_species": "s__Azonexus sp016790845",
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                "matched_fragments": 375,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009469585.1",
                "gtdb_species": "s__Azonexus sp009469585",
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                "matched_fragments": 539,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017302355.1",
                "gtdb_species": "s__Azonexus sp017302355",
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                "matched_fragments": 441,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
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                "mean_intra_species_ani": "N/A",
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                "matched_fragments": 571,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
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            {
                "accession": "GCA_008933675.1",
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                "accession": "GCA_002840765.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_018261895.1",
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                "matched_fragments": 464,
                "total_fragments": 819,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.277,
        "cell_length": 0.21,
        "doubling_h": null,
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        "optimum_tmp": 32.5,
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        "gc_content": 62.8,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
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        "mesophilic_range_tmp": null,
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
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    "_genome_taxon": [
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        "p__Pseudomonadota",
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        "Bacteria",
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        "Rhodocyclaceae",
        "Azonexus",
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        "sp017983755"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}