{ "tc_result": [ { "organism_name": "Sphingorhabdus pulchriflava", "strain": "strain=GY_G", "accession": "GCA_003367235.1", "taxid": 2292257, "species_taxid": 2292257, "relation_to_type": "type", "validated": true, "ani": 84.2456, "matched_fragments": 445, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingorhabdus lacus", "strain": "strain=IMCC1753", "accession": "GCA_009768975.1", "taxid": 392610, "species_taxid": 392610, "relation_to_type": "type", "validated": true, "ani": 77.8857, "matched_fragments": 184, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingorhabdus profundilacus", "strain": "strain=IMCC26285", "accession": "GCA_009769755.1", "taxid": 2509718, "species_taxid": 2509718, "relation_to_type": "type", "validated": true, "ani": 77.7848, "matched_fragments": 181, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas laterariae", "strain": "strain=LNB2", "accession": "GCA_900188165.1", "taxid": 861865, "species_taxid": 861865, "relation_to_type": "type", "validated": true, "ani": 77.7038, "matched_fragments": 134, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingorhabdus contaminans", "strain": "strain=KCTC32445", "accession": "GCA_007280415.1", "taxid": 1343899, "species_taxid": 1343899, "relation_to_type": "type", "validated": true, "ani": 77.6521, "matched_fragments": 168, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter portus", "strain": "strain=FM6", "accession": "GCA_003171655.1", "taxid": 2676234, "species_taxid": 2676234, "relation_to_type": "type", "validated": true, "ani": 77.5371, "matched_fragments": 133, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis macrogoltabida", "strain": "strain=203", "accession": "GCA_001314325.1", "taxid": 33050, "species_taxid": 33050, "relation_to_type": "type", "validated": true, "ani": 77.4639, "matched_fragments": 187, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chungbukense", "strain": "strain=DJ77", "accession": "GCA_001005725.1", "taxid": 56193, "species_taxid": 56193, "relation_to_type": "type", "validated": true, "ani": 77.4171, "matched_fragments": 123, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium marinum", "strain": "strain=CGMCC 1.12918", "accession": "GCA_014640055.1", "taxid": 1514948, "species_taxid": 1514948, "relation_to_type": "type", "validated": true, "ani": 77.4094, "matched_fragments": 74, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium fontiphilum", "strain": "strain=DSM 29348", "accession": "GCA_014196635.1", "taxid": 944425, "species_taxid": 944425, "relation_to_type": "type", "validated": true, "ani": 77.363, "matched_fragments": 135, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium marinum", "strain": "strain=DSM 29043", "accession": "GCA_013408095.1", "taxid": 1514948, "species_taxid": 1514948, "relation_to_type": "type", "validated": true, "ani": 77.3319, "matched_fragments": 76, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chlorophenolicum", "strain": "strain=NBRC 16172", "accession": "GCA_000722875.1", "taxid": 46429, "species_taxid": 46429, "relation_to_type": "type", "validated": true, "ani": 77.2345, "matched_fragments": 127, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas oleivorans", "strain": "strain=FW-11", "accession": "GCA_003050615.1", "taxid": 1735121, "species_taxid": 1735121, "relation_to_type": "type", "validated": true, "ani": 77.2307, "matched_fragments": 123, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas gilva", "strain": "strain=ZDH117", "accession": "GCA_003515075.1", "taxid": 2305907, "species_taxid": 2305907, "relation_to_type": "type", "validated": true, "ani": 77.1386, "matched_fragments": 145, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium kunmingense", "strain": "strain=CGMCC 1.12274", "accession": "GCA_002813245.1", "taxid": 1211806, "species_taxid": 1211806, "relation_to_type": "type", "validated": true, "ani": 77.124, "matched_fragments": 137, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium baderi", "strain": "strain=LL03", "accession": "GCA_001046655.1", "taxid": 1332080, "species_taxid": 1332080, "relation_to_type": "type", "validated": true, "ani": 77.0543, "matched_fragments": 140, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium baderi", "strain": "strain=LL03", "accession": "GCA_000445145.1", "taxid": 1332080, "species_taxid": 1332080, "relation_to_type": "type", "validated": true, "ani": 77.0306, "matched_fragments": 140, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania vesicularis", "strain": "strain=1NDH10", "accession": "GCA_019711415.1", "taxid": 2867232, "species_taxid": 2867232, "relation_to_type": "type", "validated": true, "ani": 76.8976, "matched_fragments": 105, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinicella ginsenosidimutans", "strain": "strain=BS-11", "accession": "GCA_007995055.1", "taxid": 1176539, "species_taxid": 1176539, "relation_to_type": "type", "validated": true, "ani": 76.7773, "matched_fragments": 111, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium decolorationis", "strain": "strain=502str22", "accession": "GCA_018417475.1", "taxid": 2698673, "species_taxid": 2698673, "relation_to_type": "type", "validated": true, "ani": 76.5967, "matched_fragments": 91, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allopontixanthobacter confluentis", "strain": "strain=KCTC 52259", "accession": "GCA_009827615.1", "taxid": 1849021, "species_taxid": 1849021, "relation_to_type": "type", "validated": true, "ani": 76.5264, "matched_fragments": 87, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania polymorpha", "strain": "strain=1NDH17", "accession": "GCA_019711435.1", "taxid": 2867234, "species_taxid": 2867234, "relation_to_type": "type", "validated": true, "ani": 76.4548, "matched_fragments": 108, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parasphingorhabdus litoris", "strain": "strain=DSM 22379", "accession": "GCA_020906275.1", "taxid": 394733, "species_taxid": 394733, "relation_to_type": "type", "validated": true, "ani": 76.208, "matched_fragments": 64, "total_fragments": 607, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 73.67, "contamination": 8.33, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_017987825.1", "gtdb_species": "s__Sphingorhabdus_B sp017987825", "ani": 100.0, "matched_fragments": 602, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_016707885.1", "gtdb_species": "s__Sphingorhabdus_B sp016707885", "ani": 85.6605, "matched_fragments": 445, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003367235.1", "gtdb_species": "s__Sphingorhabdus_B sp003367235", "ani": 84.2052, "matched_fragments": 446, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016720115.1", "gtdb_species": "s__Sphingorhabdus_B sp016720115", "ani": 83.3882, "matched_fragments": 438, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.85", "min_intra_species_ani": "99.81", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_016721875.1", "gtdb_species": "s__Sphingorhabdus_B sp016721875", "ani": 80.5767, "matched_fragments": 297, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.47", "min_intra_species_ani": "99.39", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009768975.1", "gtdb_species": "s__Sphingorhabdus_B lacus", "ani": 77.924, "matched_fragments": 182, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013297725.1", "gtdb_species": "s__Sphingorhabdus_B sp013297725", "ani": 77.795, "matched_fragments": 193, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009769755.1", "gtdb_species": "s__Sphingorhabdus_B profundilacus", "ani": 77.7848, "matched_fragments": 181, "total_fragments": 607, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingorhabdus_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }