{
    "type": "genome",
    "identifier": "GCA_018003385.1",
    "organism": "Ottowia sp.",
    "title": "Ottowia sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018003385.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18119235",
        "wgs_master": "JAGNEC000000000.1",
        "refseq_category": "na",
        "taxid": "1898956",
        "species_taxid": "1898956",
        "organism_name": "Ottowia sp.",
        "infraspecific_name": "",
        "isolate": "Gw_Inlet_bin_11",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/16",
        "asm_name": "ASM1800338v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/003/385/GCA_018003385.1_ASM1800338v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-16",
    "dateModified": "2021-04-16",
    "datePublished": "2021-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Ottowia sp."
        ],
        "sample_taxid": [
            "1898956"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Greifswald"
        ],
        "sample_host_location_id": [],
        "data_size": "0.255 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 23.96,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "934584",
        "Number of Sequences": "165",
        "Longest Sequences (bp)": "19874",
        "N50 (bp)": "5808",
        "Gap Ratio (%)": "0.417298",
        "GCcontent (%)": "69.6",
        "Number of CDSs": "688",
        "Average Protein Length": "302.3",
        "Coding Ratio (%)": "66.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Ottowia beijingensis",
                "strain": "strain=GCS-AN-3",
                "accession": "GCA_013423955.1",
                "taxid": 1207057,
                "species_taxid": 1207057,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.0973,
                "matched_fragments": 192,
                "total_fragments": 227,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ottowia testudinis",
                "strain": "strain=27C",
                "accession": "GCA_017498525.1",
                "taxid": 2816950,
                "species_taxid": 2816950,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.1754,
                "matched_fragments": 189,
                "total_fragments": 227,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ottowia oryzae",
                "strain": "strain=KADR8-3",
                "accession": "GCA_003008535.1",
                "taxid": 2109914,
                "species_taxid": 2109914,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.9939,
                "matched_fragments": 179,
                "total_fragments": 227,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Melaminivora alkalimesophila",
                "strain": "strain=DSM 26006",
                "accession": "GCA_003182375.1",
                "taxid": 1165852,
                "species_taxid": 1165852,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2929,
                "matched_fragments": 154,
                "total_fragments": 227,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Melaminivora alkalimesophila",
                "strain": "strain=CY1",
                "accession": "GCA_000282995.1",
                "taxid": 1165852,
                "species_taxid": 1165852,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.9212,
                "matched_fragments": 122,
                "total_fragments": 227,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 23.96,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001897615.1",
                "gtdb_species": "s__Ottowia sp001897615",
                "ani": 98.2832,
                "matched_fragments": 206,
                "total_fragments": 227,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.20",
                "min_intra_species_ani": "96.20",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017307865.1",
                "gtdb_species": "s__Ottowia sp017307865",
                "ani": 85.2372,
                "matched_fragments": 185,
                "total_fragments": 227,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.48",
                "min_intra_species_ani": "98.25",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_016703145.1",
                "gtdb_species": "s__Ottowia sp016703145",
                "ani": 84.9725,
                "matched_fragments": 174,
                "total_fragments": 227,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.21",
                "min_intra_species_ani": "99.21",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018241325.1",
                "gtdb_species": "s__Ottowia sp018241325",
                "ani": 84.298,
                "matched_fragments": 182,
                "total_fragments": 227,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018060485.1",
                "gtdb_species": "s__Ottowia sp018060485",
                "ani": 83.871,
                "matched_fragments": 156,
                "total_fragments": 227,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "98.80",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 7,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.097,
        "cell_length": 0.477,
        "doubling_h": null,
        "growth_tmp": 27.0,
        "optimum_tmp": 26.0,
        "optimum_ph": 7.3,
        "genome_size": 7048723.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 1.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Ottowia",
        "s__Ottowia sp001897615"
    ],
    "_genome_taxon": [
        "Ottowia",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Ottowia",
        "s__Ottowia sp001897615",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Ottowia",
        "Ottowia",
        "sp001897615"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}