{ "type": "genome", "identifier": "GCA_018004035.1", "organism": "Acinetobacter sp.", "title": "Acinetobacter sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018004035.1", "bioproject": "PRJNA524094", "biosample": "SAMN18119015", "wgs_master": "JAGNCZ000000000.1", "refseq_category": "na", "taxid": "472", "species_taxid": "472", "organism_name": "Acinetobacter sp.", "infraspecific_name": "", "isolate": "Go_Leine_bin_114", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/16", "asm_name": "ASM1800403v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/004/035/GCA_018004035.1_ASM1800403v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-16", "dateModified": "2021-04-16", "datePublished": "2021-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter sp." ], "sample_taxid": [ "472" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Goettingen" ], "sample_host_location_id": [], "data_size": "0.460 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 16.67, "contamination": 8.33, "strain_heterogeneity": 33.33, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1596815", "Number of Sequences": "186", "Longest Sequences (bp)": "49227", "N50 (bp)": "11532", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "40.1", "Number of CDSs": "1359", "Average Protein Length": "292.9", "Coding Ratio (%)": "74.8", "Number of rRNAs": "0", "Number of tRNAs": "20", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter halotolerans", "strain": "strain=JCM 31009", "accession": "GCA_004208515.1", "taxid": 1752076, "species_taxid": 1752076, "relation_to_type": "type", "validated": true, "ani": 93.1582, "matched_fragments": 271, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter haemolyticus", "strain": "strain=NCTC10305", "accession": "GCA_900444835.1", "taxid": 29430, "species_taxid": 29430, "relation_to_type": "type", "validated": true, "ani": 83.5623, "matched_fragments": 256, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter junii", "strain": "strain=NCTC10307", "accession": "GCA_900444875.1", "taxid": 40215, "species_taxid": 40215, "relation_to_type": "type", "validated": true, "ani": 81.455, "matched_fragments": 197, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tjernbergiae", "strain": "strain=DSM 14971", "accession": "GCA_000759995.1", "taxid": 202955, "species_taxid": 202955, "relation_to_type": "type", "validated": true, "ani": 81.099, "matched_fragments": 209, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tjernbergiae", "strain": "strain=DSM 14971", "accession": "GCA_000374425.1", "taxid": 202955, "species_taxid": 202955, "relation_to_type": "type", "validated": true, "ani": 81.0951, "matched_fragments": 205, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter tjernbergiae", "strain": "strain=CIP 107465", "accession": "GCA_000488175.1", "taxid": 202955, "species_taxid": 202955, "relation_to_type": "type", "validated": true, "ani": 81.0707, "matched_fragments": 203, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter modestus", "strain": "strain=CCM 8639", "accession": "GCA_014636095.1", "taxid": 1776740, "species_taxid": 1776740, "relation_to_type": "type", "validated": true, "ani": 80.9567, "matched_fragments": 192, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter parvus", "strain": "strain=CIP 108168", "accession": "GCA_000368025.1", "taxid": 134533, "species_taxid": 134533, "relation_to_type": "type", "validated": true, "ani": 80.6992, "matched_fragments": 163, "total_fragments": 444, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter parvus", "strain": "strain=DSM 16617", "accession": 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