{
    "type": "genome",
    "identifier": "GCA_018005495.1",
    "organism": "Burkholderiaceae bacterium",
    "title": "Burkholderiaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018005495.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18119068",
        "wgs_master": "JAGNAC000000000.1",
        "refseq_category": "na",
        "taxid": "2030806",
        "species_taxid": "2030806",
        "organism_name": "Burkholderiaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Go_SlAct_bin_268",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/16",
        "asm_name": "ASM1800549v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/005/495/GCA_018005495.1_ASM1800549v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-16",
    "dateModified": "2021-04-16",
    "datePublished": "2021-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Burkholderiaceae bacterium"
        ],
        "sample_taxid": [
            "2030806"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Goettingen"
        ],
        "sample_host_location_id": [],
        "data_size": "0.636 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 35.65,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2268648",
        "Number of Sequences": "283",
        "Longest Sequences (bp)": "43209",
        "N50 (bp)": "10530",
        "Gap Ratio (%)": "0.215988",
        "GCcontent (%)": "65.5",
        "Number of CDSs": "1962",
        "Average Protein Length": "300.7",
        "Coding Ratio (%)": "78.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "16",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_013423955.1",
                "taxid": 1207057,
                "species_taxid": 1207057,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 264,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudorhodoferax aquiterrae",
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                "taxid": 747304,
                "species_taxid": 747304,
                "relation_to_type": "type",
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                "matched_fragments": 249,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidovorax citrulli",
                "strain": "strain=DSM 17060",
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                "species_taxid": 80869,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.4553,
                "matched_fragments": 199,
                "total_fragments": 625,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylophilus ampelinus",
                "strain": "strain=CFBP 1192",
                "accession": "GCA_024832295.1",
                "taxid": 54067,
                "species_taxid": 54067,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.4355,
                "matched_fragments": 173,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Xylophilus ampelinus",
                "strain": "strain=CECT 7646",
                "accession": "GCA_003217575.1",
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                "species_taxid": 54067,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3983,
                "matched_fragments": 174,
                "total_fragments": 625,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Variovorax paradoxus",
                "strain": "strain=NBRC 15149",
                "accession": "GCA_001591365.1",
                "taxid": 34073,
                "species_taxid": 34073,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.3716,
                "matched_fragments": 253,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidovorax konjaci",
                "strain": "strain=DSM 7481",
                "accession": "GCA_900112675.1",
                "taxid": 32040,
                "species_taxid": 32040,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2923,
                "matched_fragments": 187,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ottowia testudinis",
                "strain": "strain=27C",
                "accession": "GCA_017498525.1",
                "taxid": 2816950,
                "species_taxid": 2816950,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0825,
                "matched_fragments": 204,
                "total_fragments": 625,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xylophilus rhododendri",
                "strain": "strain=KACC 21265",
                "accession": "GCA_009906855.1",
                "taxid": 2697032,
                "species_taxid": 2697032,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9427,
                "matched_fragments": 195,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Melaminivora jejuensis",
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                "accession": "GCA_017811175.1",
                "taxid": 1267217,
                "species_taxid": 1267217,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4578,
                "matched_fragments": 203,
                "total_fragments": 625,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
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        "gtdb_result": [
            {
                "accession": "GCA_016721925.1",
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                "matched_fragments": 470,
                "total_fragments": 625,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAABQG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.62",
                "min_intra_species_ani": "98.32",
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                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 9,
                "status": "conclusive"
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                "accession": "GCA_013423955.1",
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                "ani": 79.9734,
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                "total_fragments": 625,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.71",
                "min_intra_species_ani": "97.71",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_016428875.1",
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                "matched_fragments": 215,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Xylophilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014489595.1",
                "gtdb_species": "s__Acidovorax_F monticola",
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                "matched_fragments": 231,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_F",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_016702555.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ottowia",
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                "min_intra_species_af": "0.96",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_002397315.1",
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            },
            {
                "accession": "GCF_001421705.1",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.267,
        "cell_length": 0.119,
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        "growth_tmp": 30.563,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.967,
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
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        "g__JADKHE01",
        "s__JADKHE01 sp016721925"
    ],
    "_genome_taxon": [
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        "p__Pseudomonadota",
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        "f__Burkholderiaceae",
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        "s__JADKHE01 sp016721925",
        "Bacteria",
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        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "JADKHE01",
        "JADKHE01",
        "sp016721925"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}