{
    "type": "genome",
    "identifier": "GCA_018005575.1",
    "organism": "Chitinophagaceae bacterium",
    "title": "Chitinophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018005575.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18119072",
        "wgs_master": "JAGMZY000000000.1",
        "refseq_category": "na",
        "taxid": "1869212",
        "species_taxid": "1869212",
        "organism_name": "Chitinophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Go_SlAct_bin_297",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/16",
        "asm_name": "ASM1800557v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/005/575/GCA_018005575.1_ASM1800557v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-16",
    "dateModified": "2021-04-16",
    "datePublished": "2021-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophagaceae bacterium"
        ],
        "sample_taxid": [
            "1869212"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Goettingen"
        ],
        "sample_host_location_id": [],
        "data_size": "0.729 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 38.54,
        "contamination": 12.5,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2559167",
        "Number of Sequences": "287",
        "Longest Sequences (bp)": "82107",
        "N50 (bp)": "11508",
        "Gap Ratio (%)": "0.019538",
        "GCcontent (%)": "36.7",
        "Number of CDSs": "1984",
        "Average Protein Length": "324.6",
        "Coding Ratio (%)": "75.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "19",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 38.54,
            "contamination": 12.5,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016708765.1",
                "gtdb_species": "s__JJ008 sp016708765",
                "ani": 91.1564,
                "matched_fragments": 409,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.32",
                "min_intra_species_ani": "99.14",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_016706055.1",
                "gtdb_species": "s__JJ008 sp016706055",
                "ani": 86.6994,
                "matched_fragments": 385,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.30",
                "min_intra_species_ani": "99.30",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013140985.1",
                "gtdb_species": "s__JJ008 sp013140985",
                "ani": 79.1111,
                "matched_fragments": 131,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016719165.1",
                "gtdb_species": "s__JJ008 sp016719165",
                "ani": 78.5451,
                "matched_fragments": 116,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.96",
                "min_intra_species_ani": "97.46",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016719015.1",
                "gtdb_species": "s__JJ008 sp016719015",
                "ani": 78.1224,
                "matched_fragments": 164,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.23",
                "min_intra_species_ani": "99.17",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_002127295.1",
                "gtdb_species": "s__JJ008 sp002127295",
                "ani": 77.8611,
                "matched_fragments": 175,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001464625.1",
                "gtdb_species": "s__JJ008 sp001464625",
                "ani": 77.5134,
                "matched_fragments": 165,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016786885.1",
                "gtdb_species": "s__JJ008 sp016786885",
                "ani": 76.8496,
                "matched_fragments": 113,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005882315.1",
                "gtdb_species": "s__VBAR01 sp005882315",
                "ani": 76.785,
                "matched_fragments": 78,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011331705.1",
                "gtdb_species": "s__JJ008 sp011331705",
                "ani": 76.5468,
                "matched_fragments": 79,
                "total_fragments": 715,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.322,
        "cell_length": 0.364,
        "doubling_h": null,
        "growth_tmp": 30.538,
        "optimum_tmp": 29.829,
        "optimum_ph": 6.773,
        "genome_size": 5998721.602,
        "gc_content": 44.915,
        "coding_genes": 5429.047,
        "rRNA16S_genes": 3.5,
        "tRNA_genes": 54.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.225,
        "range_salinity": null,
        "facultative_respiration": 0.034,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.965,
        "mesophilic_range_tmp": 0.75,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.25,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__JJ008",
        "s__"
    ],
    "_genome_taxon": [
        "Chitinophagaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__JJ008",
        "s__",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "JJ008",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 1,
    "quality_label": "\u2b50\ufe0f"
}