{ "type": "genome", "identifier": "GCA_018006385.1", "organism": "Ilumatobacteraceae bacterium", "title": "Ilumatobacteraceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018006385.1", "bioproject": "PRJNA524094", "biosample": "SAMN18118933", "wgs_master": "JAGMYM000000000.1", "refseq_category": "na", "taxid": "2497619", "species_taxid": "2497619", "organism_name": "Ilumatobacteraceae bacterium", "infraspecific_name": "", "isolate": "Go_SlDig_bin_23", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/16", "asm_name": "ASM1800638v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/006/385/GCA_018006385.1_ASM1800638v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-16", "dateModified": "2021-04-16", "datePublished": "2021-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Ilumatobacteraceae bacterium" ], "sample_taxid": [ "2497619" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Goettingen" ], "sample_host_location_id": [], "data_size": "1.153 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4223175", "Number of Sequences": "365", "Longest Sequences (bp)": "93460", "N50 (bp)": "17664", "Gap Ratio (%)": "0.049726", "GCcontent (%)": "68.2", "Number of CDSs": "3721", "Average Protein Length": "317.9", "Coding Ratio (%)": "84.0", "Number of rRNAs": "2", "Number of tRNAs": "46", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ilumatobacter fluminis", "strain": "strain=DSM 18936", "accession": "GCA_004364865.1", "taxid": 467091, "species_taxid": 467091, "relation_to_type": "type", "validated": true, "ani": 77.5269, "matched_fragments": 285, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desertimonas flava", "strain": "strain=SYSU D60003", "accession": "GCA_003426815.1", "taxid": 2064846, "species_taxid": 2064846, "relation_to_type": "type", "validated": true, "ani": 77.3303, "matched_fragments": 354, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ilumatobacter coccineus", "strain": "strain=YM16-304", "accession": "GCA_000348785.1", "taxid": 467094, "species_taxid": 467094, "relation_to_type": "type", "validated": true, "ani": 77.0753, "matched_fragments": 284, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ilumatobacter nonamiensis", "strain": "strain=YM16-303", "accession": "GCA_000350145.1", "taxid": 467093, "species_taxid": 467093, "relation_to_type": "type", "validated": true, "ani": 77.0234, "matched_fragments": 197, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdothermincola salaria", "strain": "strain=EGI L10124", "accession": "GCA_021246445.1", "taxid": 2903142, "species_taxid": 2903142, "relation_to_type": "type", "validated": true, "ani": 76.6628, "matched_fragments": 212, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomarinicola tropica", "strain": "strain=SCSIO 58843", "accession": "GCA_009650215.1", "taxid": 2789776, "species_taxid": 2789776, "relation_to_type": "type", "validated": true, "ani": 76.5678, "matched_fragments": 211, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdothermincola sediminis", "strain": "strain=SYSU G02662", "accession": "GCA_014805525.1", "taxid": 2751370, "species_taxid": 2751370, "relation_to_type": "type", "validated": true, "ani": 76.2508, "matched_fragments": 153, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptosporangium becharense", "strain": "strain=DSM 46887", "accession": "GCA_014204985.1", "taxid": 1816182, "species_taxid": 1816182, "relation_to_type": "type", "validated": true, "ani": 75.53, "matched_fragments": 124, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { 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"strain": "strain=Marseille-Q0999", "accession": "GCA_018390595.1", "taxid": 2697499, "species_taxid": 2697499, "relation_to_type": "type", "validated": true, "ani": 75.4137, "matched_fragments": 77, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CCM 7623", "accession": "GCA_014635805.1", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 75.3443, "matched_fragments": 93, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CPCC 202695", "accession": "GCA_900104685.1", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 75.3431, "matched_fragments": 93, "total_fragments": 1222, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura physcomitrii", "strain": "strain=LD22", "accession": "GCA_008923205.2", 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