{ "type": "genome", "identifier": "GCA_018006555.1", "organism": "Acinetobacter sp.", "title": "Acinetobacter sp.", "description": "derived from metagenome; fragmented assembly", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018006555.1", "bioproject": "PRJNA524094", "biosample": "SAMN18119047", "wgs_master": "JAGMYF000000000.1", "refseq_category": "na", "taxid": "472", "species_taxid": "472", "organism_name": "Acinetobacter sp.", "infraspecific_name": "", "isolate": "Go_Prim_bin_102", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/16", "asm_name": "ASM1800655v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/006/555/GCA_018006555.1_ASM1800655v1", "excluded_from_refseq": "derived from metagenome; fragmented assembly", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-16", "dateModified": "2021-04-16", "datePublished": "2021-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Acinetobacter sp." ], "sample_taxid": [ "472" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Goettingen" ], "sample_host_location_id": [], "data_size": "0.507 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 20.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1747745", "Number of Sequences": "392", "Longest Sequences (bp)": "38258", "N50 (bp)": "4542", "Gap Ratio (%)": "0.051495", "GCcontent (%)": "38.9", "Number of CDSs": "1364", "Average Protein Length": "273.8", "Coding Ratio (%)": "64.1", "Number of rRNAs": "0", "Number of tRNAs": "28", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Acinetobacter celticus", "strain": "strain=ANC 4603", "accession": "GCA_001707755.1", "taxid": 1891224, "species_taxid": 1891224, "relation_to_type": "type", "validated": true, "ani": 91.7291, "matched_fragments": 215, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter bohemicus", "strain": "strain=ANC 3994", "accession": "GCA_000367925.1", "taxid": 1435036, "species_taxid": 1435036, "relation_to_type": "type", "validated": true, "ani": 81.9029, "matched_fragments": 195, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter lanii", "strain": "strain=185", "accession": "GCA_011578285.1", "taxid": 2715163, "species_taxid": 2715163, "relation_to_type": "type", "validated": true, "ani": 79.9273, "matched_fragments": 171, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter silvestris", "strain": "strain=ANC 4999", "accession": "GCA_002135235.1", "taxid": 1977882, "species_taxid": 1977882, "relation_to_type": "type", "validated": true, "ani": 79.7643, "matched_fragments": 158, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter albensis", "strain": "strain=ANC 4874", "accession": "GCA_900095025.1", "taxid": 1673609, "species_taxid": 1673609, "relation_to_type": "type", "validated": true, "ani": 79.7423, "matched_fragments": 158, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter wanghuae", "strain": "strain=dk386", "accession": "GCA_009557235.1", "taxid": 2662362, "species_taxid": 2662362, "relation_to_type": "type", "validated": true, "ani": 79.7085, "matched_fragments": 159, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter shaoyimingii", "strain": "strain=323-1", "accession": "GCA_011578045.1", "taxid": 2715164, "species_taxid": 2715164, "relation_to_type": "type", "validated": true, "ani": 79.6056, "matched_fragments": 172, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter gandensis", "strain": "strain=CCUG 68482", "accession": "GCA_008802205.1", "taxid": 1443941, "species_taxid": 1443941, "relation_to_type": "type", "validated": true, "ani": 79.556, "matched_fragments": 167, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter terrestris", "strain": "strain=ANC 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"taxid": 2006115, "species_taxid": 2006115, "relation_to_type": "type", "validated": true, "ani": 79.064, "matched_fragments": 163, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter pseudolwoffii", "strain": "strain=ANC 5044", "accession": "GCA_002803605.1", "taxid": 2053287, "species_taxid": 2053287, "relation_to_type": "type", "validated": true, "ani": 79.0534, "matched_fragments": 138, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acinetobacter defluvii", "strain": "strain=WCHA30", "accession": "GCA_001704615.3", "taxid": 1871111, "species_taxid": 1871111, "relation_to_type": "type", "validated": true, "ani": 79.0192, "matched_fragments": 157, "total_fragments": 399, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 20.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001707755.1", "gtdb_species": 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