{ "type": "genome", "identifier": "GCA_018006675.1", "organism": "Aeromonas sp.", "title": "Aeromonas sp.", "description": "derived from metagenome; fragmented assembly", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018006675.1", "bioproject": "PRJNA524094", "biosample": "SAMN18119273", "wgs_master": "JAGMXY000000000.1", "refseq_category": "na", "taxid": "647", "species_taxid": "647", "organism_name": "Aeromonas sp.", "infraspecific_name": "", "isolate": "Gw_Prim_bin_141", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/16", "asm_name": "ASM1800667v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/006/675/GCA_018006675.1_ASM1800667v1", "excluded_from_refseq": "derived from metagenome; fragmented assembly", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-16", "dateModified": "2021-04-16", "datePublished": "2021-04-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Aeromonas sp." ], "sample_taxid": [ "647" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Greifswald" ], "sample_host_location_id": [], "data_size": "0.514 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 12.5, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1789548", "Number of Sequences": "437", "Longest Sequences (bp)": "18082", "N50 (bp)": "4131", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.1", "Number of CDSs": "1260", "Average Protein Length": "302.6", "Coding Ratio (%)": "63.9", "Number of rRNAs": "1", "Number of tRNAs": "11", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aeromonas allosaccharophila", "strain": "strain=CECT 4199", "accession": "GCA_000819685.1", "taxid": 656, "species_taxid": 656, "relation_to_type": "type", "validated": true, "ani": 93.7169, "matched_fragments": 290, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas finlandensis", "strain": "strain=4287D", "accession": "GCA_000764645.1", "taxid": 1543375, "species_taxid": 1543375, "relation_to_type": "type", "validated": true, "ani": 91.4546, "matched_fragments": 274, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas salmonicida", "strain": "strain=NCTC12959", "accession": "GCA_900445115.1", "taxid": 645, "species_taxid": 645, "relation_to_type": "type", "validated": true, "ani": 85.4238, "matched_fragments": 264, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas salmonicida subsp. salmonicida", "strain": "strain=CIP 103209", "accession": "GCA_000820065.1", "taxid": 29491, "species_taxid": 645, "relation_to_type": "type", "validated": true, "ani": 85.3218, "matched_fragments": 267, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas salmonicida subsp. masoucida", "strain": "strain=NBRC 13784", "accession": "GCA_000647955.1", "taxid": 197700, "species_taxid": 645, "relation_to_type": "type", "validated": true, "ani": 85.3194, "matched_fragments": 262, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas sanarellii", "strain": "strain=LMG 24682", "accession": "GCA_000820085.1", "taxid": 633415, "species_taxid": 633415, "relation_to_type": "type", "validated": true, "ani": 84.9252, "matched_fragments": 268, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas taiwanensis", "strain": "strain=LMG 24683", "accession": "GCA_000820165.1", "taxid": 633417, "species_taxid": 633417, "relation_to_type": "type", "validated": true, "ani": 84.7012, "matched_fragments": 268, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas taiwanensis", "strain": "strain=LMG 24683", "accession": "GCA_000699185.1", "taxid": 633417, "species_taxid": 633417, "relation_to_type": "type", "validated": true, "ani": 84.6421, "matched_fragments": 268, "total_fragments": 379, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas lusitana", "strain": "strain=MDC 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