{
    "type": "genome",
    "identifier": "GCA_018055585.1",
    "organism": "Enterocloster sp.",
    "title": "Enterocloster sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018055585.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18120846",
        "wgs_master": "JAGPHG000000000.1",
        "refseq_category": "na",
        "taxid": "2719315",
        "species_taxid": "2719315",
        "organism_name": "Enterocloster sp.",
        "infraspecific_name": "",
        "isolate": "Gw_UH_bin_231",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1805558v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/055/585/GCA_018055585.1_ASM1805558v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Enterocloster sp."
        ],
        "sample_taxid": [
            "2719315"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Greifswald"
        ],
        "sample_host_location_id": [],
        "data_size": "0.506 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 43.06,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1755977",
        "Number of Sequences": "306",
        "Longest Sequences (bp)": "23063",
        "N50 (bp)": "6161",
        "Gap Ratio (%)": "0.011390",
        "GCcontent (%)": "47.9",
        "Number of CDSs": "1358",
        "Average Protein Length": "307.3",
        "Coding Ratio (%)": "71.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "22",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Enterocloster clostridioformis",
                "strain": "strain=NCTC11224",
                "accession": "GCA_900447015.1",
                "taxid": 1531,
                "species_taxid": 1531,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.0413,
                "matched_fragments": 125,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster bolteae",
                "strain": "strain=ATCC BAA-613",
                "accession": "GCA_002959675.1",
                "taxid": 208479,
                "species_taxid": 208479,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8346,
                "matched_fragments": 123,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster bolteae",
                "strain": "strain=ATCC BAA-613",
                "accession": "GCA_000154365.1",
                "taxid": 208479,
                "species_taxid": 208479,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8334,
                "matched_fragments": 118,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster bolteae",
                "strain": "strain=ATCC BAA-613",
                "accession": "GCA_002234575.2",
                "taxid": 208479,
                "species_taxid": 208479,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7694,
                "matched_fragments": 124,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster clostridioformis",
                "strain": "strain=ATCC 25537",
                "accession": "GCA_900113155.1",
                "taxid": 1531,
                "species_taxid": 1531,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6011,
                "matched_fragments": 129,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster asparagiformis",
                "strain": "strain=DSM 15981",
                "accession": "GCA_025149125.1",
                "taxid": 333367,
                "species_taxid": 333367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1518,
                "matched_fragments": 106,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster asparagiformis",
                "strain": "strain=DSM 15981",
                "accession": "GCA_000158075.1",
                "taxid": 333367,
                "species_taxid": 333367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.979,
                "matched_fragments": 106,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hungatella effluvii",
                "strain": "strain=DSM 24995",
                "accession": "GCA_003201875.1",
                "taxid": 1096246,
                "species_taxid": 1096246,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.186,
                "matched_fragments": 60,
                "total_fragments": 441,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 43.06,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001517625.2",
                "gtdb_species": "s__Enterocloster sp001517625",
                "ani": 99.1215,
                "matched_fragments": 426,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.90",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 9,
                "status": "conclusive"
            },
            {
                "accession": "GCF_013282095.1",
                "gtdb_species": "s__Enterocloster sp900538485",
                "ani": 80.9571,
                "matched_fragments": 322,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "98.91",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900770345.1",
                "gtdb_species": "s__Enterocloster sp900770345",
                "ani": 79.1163,
                "matched_fragments": 145,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003473545.1",
                "gtdb_species": "s__Enterocloster sp000431375",
                "ani": 78.8135,
                "matched_fragments": 161,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "98.66",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 15,
                "status": "-"
            },
            {
                "accession": "GCA_900541315.1",
                "gtdb_species": "s__Enterocloster sp900541315",
                "ani": 78.6134,
                "matched_fragments": 135,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.39",
                "min_intra_species_ani": "98.10",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_900549235.1",
                "gtdb_species": "s__Enterocloster sp900549235",
                "ani": 78.3116,
                "matched_fragments": 180,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.03",
                "min_intra_species_ani": "99.00",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900543885.1",
                "gtdb_species": "s__Enterocloster sp900543885",
                "ani": 78.3094,
                "matched_fragments": 162,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.55",
                "min_intra_species_ani": "98.55",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900759225.1",
                "gtdb_species": "s__Enterocloster sp900759225",
                "ani": 78.1866,
                "matched_fragments": 119,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.23",
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                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000233455.1",
                "gtdb_species": "s__Enterocloster citroniae",
                "ani": 77.5879,
                "matched_fragments": 136,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Enterocloster",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.23",
                "min_intra_species_ani": "99.13",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCA_018715905.1",
                "gtdb_species": "s__Caccovicinus merdipullorum",
                "ani": 77.1121,
                "matched_fragments": 68,
                "total_fragments": 441,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Caccovicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.94",
                "min_intra_species_ani": "98.69",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Enterocloster",
        "s__Enterocloster sp001517625"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Enterocloster",
        "s__Enterocloster sp001517625",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Enterocloster",
        "Enterocloster",
        "sp001517625"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}