{
    "type": "genome",
    "identifier": "GCA_018058545.1",
    "organism": "Candidatus Promineofilum sp.",
    "title": "Candidatus Promineofilum sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018058545.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18120527",
        "wgs_master": "JAGOZU000000000.1",
        "refseq_category": "na",
        "taxid": "2664178",
        "species_taxid": "2664178",
        "organism_name": "Candidatus Promineofilum sp.",
        "infraspecific_name": "",
        "isolate": "Gw_Prim_bin_199",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1805854v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/058/545/GCA_018058545.1_ASM1805854v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Promineofilum sp."
        ],
        "sample_taxid": [
            "2664178"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Greifswald"
        ],
        "sample_host_location_id": [],
        "data_size": "1.021 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3595251",
        "Number of Sequences": "185",
        "Longest Sequences (bp)": "122842",
        "N50 (bp)": "28836",
        "Gap Ratio (%)": "0.008344",
        "GCcontent (%)": "61.0",
        "Number of CDSs": "2968",
        "Average Protein Length": "342.4",
        "Coding Ratio (%)": "84.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Nonomuraea typhae",
                "strain": "strain=p1410",
                "accession": "GCA_009760925.1",
                "taxid": 2603600,
                "species_taxid": 2603600,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9046,
                "matched_fragments": 78,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Jiangella ureilytica",
                "strain": "strain=KC603",
                "accession": "GCA_004348545.1",
                "taxid": 2530374,
                "species_taxid": 2530374,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8278,
                "matched_fragments": 56,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azohydromonas lata",
                "strain": "strain=NBRC 102462",
                "accession": "GCA_001571085.1",
                "taxid": 45677,
                "species_taxid": 45677,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7933,
                "matched_fragments": 62,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura soli",
                "strain": "strain=14C53",
                "accession": "GCA_005889715.1",
                "taxid": 2508997,
                "species_taxid": 2508997,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7682,
                "matched_fragments": 53,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura montaniterrae",
                "strain": "strain=CYP1-1B",
                "accession": "GCA_008923365.1",
                "taxid": 1803903,
                "species_taxid": 1803903,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7476,
                "matched_fragments": 75,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura violacea",
                "strain": "strain=LCR2-06",
                "accession": "GCA_017573465.1",
                "taxid": 2819934,
                "species_taxid": 2819934,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.668,
                "matched_fragments": 69,
                "total_fragments": 1113,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018058545.1",
                "gtdb_species": "s__Promineofilum sp018058545",
                "ani": 100.0,
                "matched_fragments": 1103,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.89",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_900066015.1",
                "gtdb_species": "s__Promineofilum breve",
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                "matched_fragments": 639,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016707605.1",
                "gtdb_species": "s__Promineofilum sp016707605",
                "ani": 79.3427,
                "matched_fragments": 555,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017983515.1",
                "gtdb_species": "s__Promineofilum sp017983515",
                "ani": 79.0009,
                "matched_fragments": 375,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014237545.1",
                "gtdb_species": "s__Promineofilum sp014237545",
                "ani": 79.0002,
                "matched_fragments": 462,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007123775.1",
                "gtdb_species": "s__SLGK01 sp007123775",
                "ani": 76.0058,
                "matched_fragments": 81,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__SLGK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.66",
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                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_012515125.1",
                "gtdb_species": "s__JAAYYY01 sp012515125",
                "ani": 75.9505,
                "matched_fragments": 96,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__JAAYYY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016705235.1",
                "gtdb_species": "s__JADJXA01 sp016705235",
                "ani": 75.8995,
                "matched_fragments": 85,
                "total_fragments": 1113,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__JADJXA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
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                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 6,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Promineifilales",
        "f__Promineifilaceae",
        "g__Promineifilum",
        "s__Promineifilum sp018058545"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Promineofilum",
        "sp.",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Promineifilales",
        "f__Promineifilaceae",
        "g__Promineifilum",
        "s__Promineifilum sp018058545",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Promineifilales",
        "Promineifilaceae",
        "Promineifilum",
        "Promineifilum",
        "sp018058545"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}