{ "type": "genome", "identifier": "GCA_018059065.1", "organism": "Bilophila sp.", "title": "Bilophila sp.", "description": "derived from metagenome; fragmented assembly", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018059065.1", "bioproject": "PRJNA524094", "biosample": "SAMN18120498", "wgs_master": "JAGOYR000000000.1", "refseq_category": "na", "taxid": "1929485", "species_taxid": "1929485", "organism_name": "Bilophila sp.", "infraspecific_name": "", "isolate": "Gw_Inlet_bin_98", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/17", "asm_name": "ASM1805906v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/059/065/GCA_018059065.1_ASM1805906v1", "excluded_from_refseq": "derived from metagenome; fragmented assembly", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-17", "dateModified": "2021-04-17", "datePublished": "2021-04-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Bilophila sp." ], "sample_taxid": [ "1929485" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Greifswald" ], "sample_host_location_id": [], "data_size": "0.454 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 39.39, "contamination": 0.46, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1583671", "Number of Sequences": "367", "Longest Sequences (bp)": "13418", "N50 (bp)": "4337", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.7", "Number of CDSs": "1068", "Average Protein Length": "311.7", "Coding Ratio (%)": "63.1", "Number of rRNAs": "0", "Number of tRNAs": "16", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Bilophila wadsworthia", "strain": "strain=ATCC 49260", "accession": "GCA_000701705.1", "taxid": 35833, "species_taxid": 35833, "relation_to_type": "type", "validated": true, "ani": 99.4171, "matched_fragments": 344, "total_fragments": 353, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Mailhella massiliensis", "strain": "strain=Marseille-P3199", "accession": "GCA_900155525.1", "taxid": 1903261, "species_taxid": 1903261, "relation_to_type": "type", "validated": true, "ani": 77.7646, "matched_fragments": 56, "total_fragments": 353, "ani_threshold": 95, 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"Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Bilophila", "Bilophila", "wadsworthia" ], "_meo": [ { "id": "MEO_0000035", "label": "waste water" } ], "quality": 2, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f" }