{
    "type": "genome",
    "identifier": "GCA_018059525.1",
    "organism": "Alistipes sp.",
    "title": "Alistipes sp.",
    "description": "derived from metagenome; incomplete metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018059525.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18120474",
        "wgs_master": "JAGOXT000000000.1",
        "refseq_category": "na",
        "taxid": "1872444",
        "species_taxid": "1872444",
        "organism_name": "Alistipes sp.",
        "infraspecific_name": "",
        "isolate": "Gw_Inlet_bin_286",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1805952v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/059/525/GCA_018059525.1_ASM1805952v1",
        "excluded_from_refseq": "derived from metagenome; incomplete metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Alistipes sp."
        ],
        "sample_taxid": [
            "1872444"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Greifswald"
        ],
        "sample_host_location_id": [],
        "data_size": "0.463 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 79.17,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1612207",
        "Number of Sequences": "202",
        "Longest Sequences (bp)": "45430",
        "N50 (bp)": "9239",
        "Gap Ratio (%)": "0.111648",
        "GCcontent (%)": "55.5",
        "Number of CDSs": "1231",
        "Average Protein Length": "319.7",
        "Coding Ratio (%)": "73.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Alistipes onderdonkii subsp. vulgaris",
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                "taxid": 2585117,
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                "status": "below_threshold"
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                "accession": "GCA_000265365.1",
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                "species_taxid": 214856,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
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                "accession": "GCA_000210575.1",
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                "species_taxid": 328814,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "status": "below_threshold"
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            {
                "organism_name": "Alistipes shahii",
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                "accession": "GCA_025145845.1",
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                "species_taxid": 328814,
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                "status": "below_threshold"
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            {
                "organism_name": "Alistipes onderdonkii",
                "strain": "strain=DSM 19147",
                "accession": "GCA_025145285.1",
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                "species_taxid": 328813,
                "relation_to_type": "type",
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                "ani": 79.7598,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes onderdonkii",
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                "accession": "GCA_000374505.1",
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                "ani": 79.6844,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes dispar",
                "strain": "strain=5CPEGH6",
                "accession": "GCA_006542685.1",
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                "species_taxid": 2585119,
                "relation_to_type": "type",
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                "ani": 79.6442,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes senegalensis",
                "strain": "strain=JC50",
                "accession": "GCA_025145645.1",
                "taxid": 1288121,
                "species_taxid": 1288121,
                "relation_to_type": "type",
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                "ani": 79.5643,
                "matched_fragments": 225,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes timonensis",
                "strain": "strain=DSM 25383",
                "accession": "GCA_900107675.1",
                "taxid": 1465754,
                "species_taxid": 1465754,
                "relation_to_type": "type",
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                "ani": 79.3844,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes provencensis",
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                "accession": "GCA_900083545.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes montrealensis",
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                "accession": "GCA_018362775.1",
                "taxid": 2834113,
                "species_taxid": 2834113,
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                "validated": true,
                "ani": 78.8063,
                "matched_fragments": 194,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes ihumii",
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                "taxid": 1470347,
                "species_taxid": 1470347,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 72,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 79.17,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_000154465.1",
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        "rRNA16S_genes": 2.0,
        "tRNA_genes": 48.0,
        "gram_stain": 0.166,
        "sporulation": 0.0,
        "motility": 0.166,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.833,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.166,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
        "g__Alistipes",
        "s__Alistipes putredinis"
    ],
    "_genome_taxon": [
        "Alistipes",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
        "g__Alistipes",
        "s__Alistipes putredinis",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Rikenellaceae",
        "Alistipes",
        "Alistipes",
        "putredinis"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}