{
    "type": "genome",
    "identifier": "GCA_018059565.1",
    "organism": "Sulfurospirillum sp.",
    "title": "Sulfurospirillum sp.",
    "description": "derived from metagenome; fragmented assembly",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018059565.1",
        "bioproject": "PRJNA524094",
        "biosample": "SAMN18120477",
        "wgs_master": "JAGOXW000000000.1",
        "refseq_category": "na",
        "taxid": "2053622",
        "species_taxid": "2053622",
        "organism_name": "Sulfurospirillum sp.",
        "infraspecific_name": "",
        "isolate": "Gw_Inlet_bin_302",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1805956v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/059/565/GCA_018059565.1_ASM1805956v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sulfurospirillum sp."
        ],
        "sample_taxid": [
            "2053622"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Greifswald"
        ],
        "sample_host_location_id": [],
        "data_size": "0.329 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.67,
        "contamination": 8.43,
        "strain_heterogeneity": 84.62,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1139208",
        "Number of Sequences": "260",
        "Longest Sequences (bp)": "23975",
        "N50 (bp)": "4369",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.7",
        "Number of CDSs": "1011",
        "Average Protein Length": "262.7",
        "Coding Ratio (%)": "70.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "28",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Sulfurospirillum deleyianum",
                "strain": "strain=DSM 6946",
                "accession": "GCA_000024885.1",
                "taxid": 65553,
                "species_taxid": 65553,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.9711,
                "matched_fragments": 189,
                "total_fragments": 246,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurospirillum barnesii",
                "strain": "strain=SES-3",
                "accession": "GCA_000265295.1",
                "taxid": 44674,
                "species_taxid": 44674,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.1012,
                "matched_fragments": 183,
                "total_fragments": 246,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurospirillum multivorans",
                "strain": "strain=DSM 12446",
                "accession": "GCA_000568815.1",
                "taxid": 66821,
                "species_taxid": 66821,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.7432,
                "matched_fragments": 130,
                "total_fragments": 246,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurospirillum halorespirans",
                "strain": "strain=DSM 13726; PCE-M2",
                "accession": "GCA_001723605.1",
                "taxid": 194424,
                "species_taxid": 194424,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6779,
                "matched_fragments": 131,
                "total_fragments": 246,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 66.67,
            "contamination": 8.43,
            "strain_heterogeneity": 84.62
        },
        "gtdb_result": [
            {
                "accession": "GCA_016930915.1",
                "gtdb_species": "s__Sulfurospirillum sp016930915",
                "ani": 93.1145,
                "matched_fragments": 198,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.92",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_009930355.1",
                "gtdb_species": "s__Sulfurospirillum sp009930355",
                "ani": 91.5822,
                "matched_fragments": 157,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000024885.1",
                "gtdb_species": "s__Sulfurospirillum deleyianum",
                "ani": 86.9711,
                "matched_fragments": 189,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000265295.1",
                "gtdb_species": "s__Sulfurospirillum barnesii",
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                "matched_fragments": 183,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017860615.1",
                "gtdb_species": "s__Sulfurospirillum sp017860615",
                "ani": 79.9208,
                "matched_fragments": 145,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000813345.1",
                "gtdb_species": "s__Sulfurospirillum arsenophilum",
                "ani": 79.7487,
                "matched_fragments": 139,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002309535.1",
                "gtdb_species": "s__Sulfurospirillum sp002309535",
                "ani": 79.475,
                "matched_fragments": 133,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.54",
                "min_intra_species_ani": "96.51",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002307095.1",
                "gtdb_species": "s__Sulfurospirillum sp002307095",
                "ani": 77.922,
                "matched_fragments": 97,
                "total_fragments": 246,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurospirillaceae;g__Sulfurospirillum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.488,
        "cell_length": 0.102,
        "doubling_h": null,
        "growth_tmp": 28.777,
        "optimum_tmp": 27.5,
        "optimum_ph": 7.183,
        "genome_size": 2721523.535,
        "gc_content": 40.519,
        "coding_genes": 2708.866,
        "rRNA16S_genes": 2.4,
        "tRNA_genes": 43.6,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": 1.0,
        "facultative_respiration": 0.5,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.428,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.142,
        "spiral_cell_shape": 0.428
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurospirillaceae",
        "g__Sulfurospirillum",
        "s__Sulfurospirillum sp021206415"
    ],
    "_genome_taxon": [
        "Sulfurospirillum",
        "sp.",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurospirillaceae",
        "g__Sulfurospirillum",
        "s__Sulfurospirillum sp021206415",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurospirillaceae",
        "Sulfurospirillum",
        "Sulfurospirillum",
        "sp021206415"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}