{
    "type": "genome",
    "identifier": "GCA_018064505.1",
    "organism": "Prevotellaceae bacterium",
    "title": "Prevotellaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Quadram Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018064505.1",
        "bioproject": "PRJNA590977",
        "biosample": "SAMN18472539",
        "wgs_master": "JAGHVC000000000.1",
        "refseq_category": "na",
        "taxid": "2049047",
        "species_taxid": "2049047",
        "organism_name": "Prevotellaceae bacterium",
        "infraspecific_name": "",
        "isolate": "E5_9",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1806450v1",
        "submitter": "Quadram Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/064/505/GCA_018064505.1_ASM1806450v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Prevotellaceae bacterium"
        ],
        "sample_taxid": [
            "2049047"
        ],
        "sample_host_organism": [
            "Equus ferus caballus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom:Surrey"
        ],
        "sample_host_location_id": [],
        "data_size": "0.917 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 76.52,
        "contamination": 8.85,
        "strain_heterogeneity": 75.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3209329",
        "Number of Sequences": "245",
        "Longest Sequences (bp)": "107397",
        "N50 (bp)": "19919",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.2",
        "Number of CDSs": "2326",
        "Average Protein Length": "379.8",
        "Coding Ratio (%)": "82.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 76.52,
            "contamination": 8.85,
            "strain_heterogeneity": 75.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018064505.1",
                "gtdb_species": "s__UBA4334 sp018064505",
                "ani": 100.0,
                "matched_fragments": 942,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018064885.1",
                "gtdb_species": "s__UBA4334 sp018064885",
                "ani": 79.94,
                "matched_fragments": 264,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018065565.1",
                "gtdb_species": "s__UBA1786 sp018065565",
                "ani": 79.5563,
                "matched_fragments": 74,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA1786",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017961965.1",
                "gtdb_species": "s__UBA4334 sp017961965",
                "ani": 77.785,
                "matched_fragments": 84,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902801475.1",
                "gtdb_species": "s__UBA4334 sp902801475",
                "ani": 77.6998,
                "matched_fragments": 123,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.71",
                "min_intra_species_ani": "97.36",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 15,
                "status": "-"
            },
            {
                "accession": "GCA_900316505.1",
                "gtdb_species": "s__UBA4334 sp900316505",
                "ani": 77.6464,
                "matched_fragments": 112,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.97",
                "min_intra_species_ani": "97.14",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 54,
                "status": "-"
            },
            {
                "accession": "GCA_017617575.1",
                "gtdb_species": "s__UBA4334 sp017617575",
                "ani": 77.6105,
                "matched_fragments": 127,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905235525.1",
                "gtdb_species": "s__UBA4334 sp905235525",
                "ani": 77.5939,
                "matched_fragments": 92,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017540585.1",
                "gtdb_species": "s__UBA4334 sp017540585",
                "ani": 77.4992,
                "matched_fragments": 131,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.33",
                "min_intra_species_ani": "96.33",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017448965.1",
                "gtdb_species": "s__UBA4334 sp017448965",
                "ani": 77.2736,
                "matched_fragments": 122,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012729225.1",
                "gtdb_species": "s__UBA4334 sp012729225",
                "ani": 77.2132,
                "matched_fragments": 98,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900318775.1",
                "gtdb_species": "s__UBA4334 sp900318775",
                "ani": 77.2084,
                "matched_fragments": 127,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.63",
                "min_intra_species_ani": "98.03",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_016302435.1",
                "gtdb_species": "s__UBA4334 sp016302435",
                "ani": 77.1841,
                "matched_fragments": 84,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902786925.1",
                "gtdb_species": "s__UBA4334 sp902786925",
                "ani": 77.1605,
                "matched_fragments": 134,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017617805.1",
                "gtdb_species": "s__UBA4334 sp017617805",
                "ani": 77.0905,
                "matched_fragments": 98,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017483605.1",
                "gtdb_species": "s__UBA4334 sp017483605",
                "ani": 77.0857,
                "matched_fragments": 125,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.79",
                "min_intra_species_ani": "96.79",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902800305.1",
                "gtdb_species": "s__UBA4334 sp902800305",
                "ani": 76.9966,
                "matched_fragments": 124,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.11",
                "min_intra_species_ani": "97.11",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016280445.1",
                "gtdb_species": "s__UBA4334 sp016280445",
                "ani": 76.9448,
                "matched_fragments": 130,
                "total_fragments": 949,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4334",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.225,
        "cell_length": 0.118,
        "doubling_h": null,
        "growth_tmp": 36.775,
        "optimum_tmp": 35.358,
        "optimum_ph": 7.1,
        "genome_size": 3057162.545,
        "gc_content": 45.298,
        "coding_genes": 2508.172,
        "rRNA16S_genes": 4.0,
        "tRNA_genes": 50.875,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.976,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.023,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__UBA4334",
        "s__UBA4334 sp018064505"
    ],
    "_genome_taxon": [
        "Prevotellaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__UBA4334",
        "s__UBA4334 sp018064505",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "UBA4334",
        "UBA4334",
        "sp018064505"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}