{
    "type": "genome",
    "identifier": "GCA_018065295.1",
    "organism": "Eubacterium sp.",
    "title": "Eubacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Quadram Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018065295.1",
        "bioproject": "PRJNA590977",
        "biosample": "SAMN18472501",
        "wgs_master": "JAGHTQ000000000.1",
        "refseq_category": "na",
        "taxid": "142586",
        "species_taxid": "142586",
        "organism_name": "Eubacterium sp.",
        "infraspecific_name": "",
        "isolate": "E4_13",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/04/17",
        "asm_name": "ASM1806529v1",
        "submitter": "Quadram Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/065/295/GCA_018065295.1_ASM1806529v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-04-17",
    "dateModified": "2021-04-17",
    "datePublished": "2021-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Eubacterium sp."
        ],
        "sample_taxid": [
            "142586"
        ],
        "sample_host_organism": [
            "Equus ferus caballus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom:Surrey"
        ],
        "sample_host_location_id": [],
        "data_size": "0.487 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 94.91,
        "contamination": 0.46,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1697658",
        "Number of Sequences": "254",
        "Longest Sequences (bp)": "36971",
        "N50 (bp)": "8916",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.3",
        "Number of CDSs": "1368",
        "Average Protein Length": "310.6",
        "Coding Ratio (%)": "75.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "22",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 94.91,
            "contamination": 0.46,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018065295.1",
                "gtdb_species": "s__Copromorpha sp018065295",
                "ani": 99.9999,
                "matched_fragments": 428,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Copromorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017416795.1",
                "gtdb_species": "s__Copromorpha sp017416795",
                "ani": 78.8314,
                "matched_fragments": 66,
                "total_fragments": 430,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Copromorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.76",
                "min_intra_species_ani": "95.76",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.325,
        "cell_length": 0.215,
        "doubling_h": null,
        "growth_tmp": 36.972,
        "optimum_tmp": 37.071,
        "optimum_ph": null,
        "genome_size": 3245697.074,
        "gc_content": 41.131,
        "coding_genes": 3227.555,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 59.583,
        "gram_stain": 0.95,
        "sporulation": 0.0,
        "motility": 0.5,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Anaerovoracaceae",
        "g__Lentihominibacter",
        "s__Lentihominibacter sp018065295"
    ],
    "_genome_taxon": [
        "Eubacterium",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Anaerovoracaceae",
        "g__Lentihominibacter",
        "s__Lentihominibacter sp018065295",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Peptostreptococcales",
        "Anaerovoracaceae",
        "Lentihominibacter",
        "Lentihominibacter",
        "sp018065295"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}