{ "type": "genome", "identifier": "GCA_018067345.1", "organism": "Paraperlucidibaca sp.", "title": "Paraperlucidibaca sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Calgary", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018067345.1", "bioproject": "PRJNA686385", "biosample": "SAMN18558017", "wgs_master": "JAGPUT000000000.1", "refseq_category": "na", "taxid": "2708021", "species_taxid": "2708021", "organism_name": "Paraperlucidibaca sp.", "infraspecific_name": "", "isolate": "640_Coassembly_bin.17", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/17", "asm_name": "ASM1806734v1", "submitter": "University of Calgary", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/067/345/GCA_018067345.1_ASM1806734v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-17", "dateModified": "2021-04-17", "datePublished": "2021-04-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Paraperlucidibaca sp." ], "sample_taxid": [ "2708021" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Labrador Sea", "University of Calgary" ], "sample_host_location_id": [], "data_size": "0.559 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": 4.0, "max": 4.0 }, "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1950186", "Number of Sequences": "99", "Longest Sequences (bp)": "71679", "N50 (bp)": 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"mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.523, "cell_length": 0.352, "doubling_h": null, "growth_tmp": 24.0, "optimum_tmp": 25.0, "optimum_ph": 7.25, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 0.0, "sporulation": null, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Pseudomonadales", "f__Moraxellaceae", "g__Perlucidibaca", "s__Perlucidibaca sp018066805" ], "_genome_taxon": [ "Paraperlucidibaca", "sp.", "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Pseudomonadales", "f__Moraxellaceae", "g__Perlucidibaca", "s__Perlucidibaca sp018066805", "Bacteria", "Pseudomonadota", "Gammaproteobacteria", "Pseudomonadales", "Moraxellaceae", "Perlucidibaca", "Perlucidibaca", "sp018066805" ], "_meo": [ { "id": "MEO_0000066", "label": "sediment" }, { "id": "MEO_0000327", "label": "petroleum" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }