{
    "type": "genome",
    "identifier": "GCA_018266355.1",
    "organism": "Bdellovibrionales bacterium",
    "title": "Bdellovibrionales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018266355.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17574016",
        "wgs_master": "JAFEAP000000000.1",
        "refseq_category": "na",
        "taxid": "2053517",
        "species_taxid": "2053517",
        "organism_name": "Bdellovibrionales bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS-2",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826635v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/266/355/GCA_018266355.1_ASM1826635v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bdellovibrionales bacterium"
        ],
        "sample_taxid": [
            "2053517"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "1.077 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3914189",
        "Number of Sequences": "30",
        "Longest Sequences (bp)": "909053",
        "N50 (bp)": "240121",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.1",
        "Number of CDSs": "3664",
        "Average Protein Length": "326.4",
        "Coding Ratio (%)": "91.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Vulgatibacter incomptus",
                "strain": "strain=DSM 27710",
                "accession": "GCA_001263175.1",
                "taxid": 1391653,
                "species_taxid": 1391653,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2868,
                "matched_fragments": 70,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus soli",
                "strain": "strain=ZKHCc1 1396",
                "accession": "GCA_014930455.1",
                "taxid": 2710757,
                "species_taxid": 2710757,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1052,
                "matched_fragments": 51,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0878,
                "matched_fragments": 66,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus terminator",
                "strain": "strain=CA054A",
                "accession": "GCA_003611635.1",
                "taxid": 2316733,
                "species_taxid": 2316733,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0662,
                "matched_fragments": 50,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia youngii",
                "strain": "strain=JPY169",
                "accession": "GCA_013366925.1",
                "taxid": 2782701,
                "species_taxid": 2782701,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0621,
                "matched_fragments": 69,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia atlantica",
                "strain": "strain=CNPSo 3155",
                "accession": "GCA_009362785.1",
                "taxid": 2654982,
                "species_taxid": 2654982,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0166,
                "matched_fragments": 68,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia tuberum",
                "strain": "strain=LMG 21444",
                "accession": "GCA_902833905.1",
                "taxid": 157910,
                "species_taxid": 157910,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9761,
                "matched_fragments": 69,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia calidae",
                "strain": "",
                "accession": "GCA_900044055.2",
                "taxid": 1777139,
                "species_taxid": 1777139,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.965,
                "matched_fragments": 61,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia pedi",
                "strain": "",
                "accession": "GCA_001544915.2",
                "taxid": 1777141,
                "species_taxid": 1777141,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9186,
                "matched_fragments": 75,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia ptereochthonis",
                "strain": "",
                "accession": "GCA_001545075.2",
                "taxid": 1777144,
                "species_taxid": 1777144,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8892,
                "matched_fragments": 86,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia cordobensis",
                "strain": "",
                "accession": "GCA_001544575.2",
                "taxid": 1353886,
                "species_taxid": 1353886,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8853,
                "matched_fragments": 79,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia cordobensis",
                "strain": "strain=LMG 27620",
                "accession": "GCA_001278535.1",
                "taxid": 1353886,
                "species_taxid": 1353886,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8621,
                "matched_fragments": 84,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Caballeronia fortuita",
                "strain": "",
                "accession": "GCA_001544835.2",
                "taxid": 1777138,
                "species_taxid": 1777138,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7862,
                "matched_fragments": 57,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dactylosporangium matsuzakiense",
                "strain": "strain=NRRL B-16293",
                "accession": "GCA_025264725.1",
                "taxid": 53360,
                "species_taxid": 53360,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6533,
                "matched_fragments": 75,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dactylosporangium siamense",
                "strain": "strain=NBRC 106093",
                "accession": "GCA_016862795.1",
                "taxid": 685454,
                "species_taxid": 685454,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6187,
                "matched_fragments": 105,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dactylosporangium vinaceum",
                "strain": "strain=NRRL B-16297",
                "accession": "GCA_019904175.1",
                "taxid": 53362,
                "species_taxid": 53362,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.5742,
                "matched_fragments": 95,
                "total_fragments": 1290,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018266355.1",
                "gtdb_species": "s__JACMQW01 sp018266355",
                "ani": 100.0,
                "matched_fragments": 1288,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia_A;o__UBA1018;f__UBA1018;g__JACMQW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_014376785.1",
                "gtdb_species": "s__JACMQW01 sp014376785",
                "ani": 76.3135,
                "matched_fragments": 110,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia_A;o__UBA1018;f__UBA1018;g__JACMQW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016194795.1",
                "gtdb_species": "s__JACQAX01 sp016194795",
                "ani": 75.8631,
                "matched_fragments": 79,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia_A;o__UBA1018;f__UBA923;g__JACQAX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014378465.1",
                "gtdb_species": "s__UBA1018 sp014378465",
                "ani": 75.3898,
                "matched_fragments": 56,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia_A;o__UBA1018;f__UBA1018;g__UBA1018",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009362785.1",
                "gtdb_species": "s__Paraburkholderia atlantica",
                "ani": 75.007,
                "matched_fragments": 69,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.68",
                "min_intra_species_ani": "97.45",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_001580565.1",
                "gtdb_species": "s__Caballeronia megalochromosomata",
                "ani": 74.9565,
                "matched_fragments": 69,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caballeronia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016873715.1",
                "gtdb_species": "s__VGWF01 sp016873715",
                "ani": 74.7713,
                "matched_fragments": 59,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__PWTM01;f__CAACVY01;g__VGWF01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016178505.1",
                "gtdb_species": "s__JACOTG01 sp016178505",
                "ani": 74.6927,
                "matched_fragments": 96,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__JACOTG01;o__JACOTG01;f__JACOTG01;g__JACOTG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.82",
                "min_intra_species_ani": "99.82",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_016862795.1",
                "gtdb_species": "s__Dactylosporangium siamense",
                "ani": 74.6197,
                "matched_fragments": 105,
                "total_fragments": 1290,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Dactylosporangium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": -0.023,
        "doubling_h": 0.146,
        "growth_tmp": 29.0,
        "optimum_tmp": 29.0,
        "optimum_ph": null,
        "genome_size": 3168292.034,
        "gc_content": 45.625,
        "coding_genes": 2993.954,
        "rRNA16S_genes": 1.416,
        "tRNA_genes": 33.928,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.5,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.5,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bdellovibrionota",
        "c__UBA1018",
        "o__UBA1018",
        "f__UBA1018",
        "g__JACMQW01",
        "s__JACMQW01 sp018266355"
    ],
    "_genome_taxon": [
        "Bdellovibrionales",
        "bacterium",
        "d__Bacteria",
        "p__Bdellovibrionota",
        "c__UBA1018",
        "o__UBA1018",
        "f__UBA1018",
        "g__JACMQW01",
        "s__JACMQW01 sp018266355",
        "Bacteria",
        "Bdellovibrionota",
        "UBA1018",
        "UBA1018",
        "UBA1018",
        "JACMQW01",
        "JACMQW01",
        "sp018266355"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}