{
    "type": "genome",
    "identifier": "GCA_018266535.1",
    "organism": "Bacteroidota bacterium",
    "title": "Bacteroidota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018266535.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17573974",
        "wgs_master": "JAFEAG000000000.1",
        "refseq_category": "na",
        "taxid": "1898104",
        "species_taxid": "1898104",
        "organism_name": "Bacteroidota bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS LIN-53",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826653v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/266/535/GCA_018266535.1_ASM1826653v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidota bacterium"
        ],
        "sample_taxid": [
            "1898104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "1.038 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3684689",
        "Number of Sequences": "48",
        "Longest Sequences (bp)": "752637",
        "N50 (bp)": "274478",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.5",
        "Number of CDSs": "3110",
        "Average Protein Length": "347.6",
        "Coding Ratio (%)": "88.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Panacibacter ginsenosidivorans",
                "strain": "strain=Gsoil1550",
                "accession": "GCA_007971225.1",
                "taxid": 1813871,
                "species_taxid": 1813871,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9202,
                "matched_fragments": 61,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacibacter luteus",
                "strain": "strain=TTM-7",
                "accession": "GCA_004118265.1",
                "taxid": 2508719,
                "species_taxid": 2508719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6647,
                "matched_fragments": 64,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea flava",
                "strain": "strain=CCUG 51397",
                "accession": "GCA_001623405.1",
                "taxid": 714549,
                "species_taxid": 714549,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 75.5693,
                "matched_fragments": 52,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea lipotrueae",
                "strain": "strain=TMF_100",
                "accession": "GCA_019249625.1",
                "taxid": 2803817,
                "species_taxid": 2803817,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5337,
                "matched_fragments": 52,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella caeni",
                "strain": "strain=HX-16-21",
                "accession": "GCA_004834005.1",
                "taxid": 2569763,
                "species_taxid": 2569763,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4168,
                "matched_fragments": 60,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella yeongjuensis",
                "strain": "strain=DSM 17621",
                "accession": "GCA_002077935.1",
                "taxid": 354355,
                "species_taxid": 354355,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3106,
                "matched_fragments": 54,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella yeongjuensis",
                "strain": "strain=DSM 17621",
                "accession": "GCA_900110245.1",
                "taxid": 354355,
                "species_taxid": 354355,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2773,
                "matched_fragments": 53,
                "total_fragments": 1201,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018266555.1",
                "gtdb_species": "s__UTBCD1 sp018266555",
                "ani": 99.9451,
                "matched_fragments": 1107,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UTBCD1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002066995.1",
                "gtdb_species": "s__UTBCD1 sp002066995",
                "ani": 78.099,
                "matched_fragments": 503,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UTBCD1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018267515.1",
                "gtdb_species": "s__UTBCD1 sp018267515",
                "ani": 77.6889,
                "matched_fragments": 375,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UTBCD1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.81",
                "min_intra_species_ani": "99.81",
                "mean_intra_species_af": "0.71",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018267535.1",
                "gtdb_species": "s__JAFDYH01 sp018267535",
                "ani": 76.3528,
                "matched_fragments": 118,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JAFDYH01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.33",
                "min_intra_species_ani": "98.33",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002069045.1",
                "gtdb_species": "s__JJ008 sp002069045",
                "ani": 76.3368,
                "matched_fragments": 87,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005882975.1",
                "gtdb_species": "s__VBAS01 sp005882975",
                "ani": 76.2241,
                "matched_fragments": 152,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAS01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016708765.1",
                "gtdb_species": "s__JJ008 sp016708765",
                "ani": 76.0854,
                "matched_fragments": 122,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.32",
                "min_intra_species_ani": "99.14",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_902826165.1",
                "gtdb_species": "s__JJ008 sp902826165",
                "ani": 76.0854,
                "matched_fragments": 153,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002400415.1",
                "gtdb_species": "s__JJ008 sp002400415",
                "ani": 76.0829,
                "matched_fragments": 135,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016235125.1",
                "gtdb_species": "s__JJ008 sp016235125",
                "ani": 76.0799,
                "matched_fragments": 172,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016719165.1",
                "gtdb_species": "s__JJ008 sp016719165",
                "ani": 76.029,
                "matched_fragments": 132,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.96",
                "min_intra_species_ani": "97.46",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016719015.1",
                "gtdb_species": "s__JJ008 sp016719015",
                "ani": 75.9536,
                "matched_fragments": 151,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.23",
                "min_intra_species_ani": "99.17",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_016787085.1",
                "gtdb_species": "s__VBAT01 sp016787085",
                "ani": 75.9462,
                "matched_fragments": 125,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016720585.1",
                "gtdb_species": "s__JJ008 sp016720585",
                "ani": 75.9291,
                "matched_fragments": 130,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.96",
                "min_intra_species_ani": "98.85",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_016787135.1",
                "gtdb_species": "s__VBAT01 sp016787135",
                "ani": 75.8873,
                "matched_fragments": 109,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016786885.1",
                "gtdb_species": "s__JJ008 sp016786885",
                "ani": 75.8849,
                "matched_fragments": 135,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016706055.1",
                "gtdb_species": "s__JJ008 sp016706055",
                "ani": 75.8659,
                "matched_fragments": 133,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.30",
                "min_intra_species_ani": "99.30",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_015654695.1",
                "gtdb_species": "s__VBAT01 sp015654695",
                "ani": 75.8589,
                "matched_fragments": 134,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002337125.1",
                "gtdb_species": "s__Lacibacter sp002337125",
                "ani": 75.7838,
                "matched_fragments": 72,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Lacibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005883765.1",
                "gtdb_species": "s__UTBCD1 sp005883765",
                "ani": 75.5673,
                "matched_fragments": 95,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UTBCD1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017882215.1",
                "gtdb_species": "s__Ginsengibacter sp017882215",
                "ani": 75.3566,
                "matched_fragments": 65,
                "total_fragments": 1201,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__UTBCD1",
        "s__UTBCD1 sp018266555"
    ],
    "_genome_taxon": [
        "Bacteroidota",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__UTBCD1",
        "s__UTBCD1 sp018266555",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "UTBCD1",
        "UTBCD1",
        "sp018266555"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}