{ "type": "genome", "identifier": "GCA_018266775.1", "organism": "Bacteroidota bacterium", "title": "Bacteroidota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018266775.1", "bioproject": "PRJNA694732", "biosample": "SAMN17573930", "wgs_master": "JAFDZS000000000.1", "refseq_category": "na", "taxid": "1898104", "species_taxid": "1898104", "organism_name": "Bacteroidota bacterium", "infraspecific_name": "", "isolate": "SZAS-9", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/04", "asm_name": "ASM1826677v1", "submitter": "The University Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/266/775/GCA_018266775.1_ASM1826677v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-04", "dateModified": "2021-05-04", "datePublished": "2021-05-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacteroidota bacterium" ], "sample_taxid": [ "1898104" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Shenzhen" ], "sample_host_location_id": [], "data_size": "1.424 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5079271", "Number of Sequences": "24", "Longest Sequences (bp)": "749189", "N50 (bp)": "442259", "Gap Ratio (%)": "0.011793", "GCcontent (%)": "41.2", "Number of CDSs": "4201", "Average Protein Length": "355.9", "Coding Ratio (%)": "88.3", "Number of rRNAs": "1", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Hydrotalea flava", "strain": "strain=CCUG 51397", "accession": "GCA_001623405.1", "taxid": 714549, "species_taxid": 714549, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9168, "matched_fragments": 83, "total_fragments": 1680, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ferruginibacter albus", "strain": "strain=KIS38-8", "accession": "GCA_020042285.1", "taxid": 2875540, "species_taxid": 2875540, "relation_to_type": "type", "validated": true, "ani": 76.3027, "matched_fragments": 145, "total_fragments": 1680, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lacibacter cauensis", "strain": "strain=CGMCC 1.7271", 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2838156, "relation_to_type": "type", "validated": true, "ani": 75.9118, "matched_fragments": 53, "total_fragments": 1680, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parafilimonas terrae", "strain": "strain=DSM 28286", "accession": "GCA_900115755.1", "taxid": 1465490, "species_taxid": 1465490, "relation_to_type": "type", "validated": true, "ani": 75.8855, "matched_fragments": 99, "total_fragments": 1680, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrotalea lipotrueae", "strain": "strain=TMF_100", "accession": "GCA_019249625.1", "taxid": 2803817, "species_taxid": 2803817, "relation_to_type": "type", "validated": true, "ani": 75.8752, "matched_fragments": 81, "total_fragments": 1680, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavisolibacter ginsenosidimutans", "strain": "strain=Gsoil 636", "accession": "GCA_007970805.1", "taxid": 661481, "species_taxid": 661481, "relation_to_type": "type", 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