{ "type": "genome", "identifier": "GCA_018267005.1", "organism": "Bacteroidota bacterium", "title": "Bacteroidota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018267005.1", "bioproject": "PRJNA694732", "biosample": "SAMN17574003", "wgs_master": "JAFDZK000000000.1", "refseq_category": "na", "taxid": "1898104", "species_taxid": "1898104", "organism_name": "Bacteroidota bacterium", "infraspecific_name": "", "isolate": "SZAS-82", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/04", "asm_name": "ASM1826700v1", "submitter": "The University Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/267/005/GCA_018267005.1_ASM1826700v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-04", "dateModified": "2021-05-04", "datePublished": "2021-05-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacteroidota bacterium" ], "sample_taxid": [ "1898104" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Shenzhen" ], "sample_host_location_id": [], "data_size": "1.370 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 84.95, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4767619", "Number of Sequences": "598", "Longest Sequences (bp)": "61680", "N50 (bp)": "13127", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "47.2", "Number of CDSs": "3848", "Average Protein Length": "307.9", "Coding Ratio (%)": "74.6", "Number of rRNAs": "1", "Number of tRNAs": "35", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Mucilaginibacter ginsenosidivorans", "strain": "strain=Gsoil 3017", "accession": "GCA_007971025.1", "taxid": 398053, "species_taxid": 398053, "relation_to_type": "type", "validated": true, "ani": 77.7383, "matched_fragments": 402, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter psychrotolerans", "strain": "strain=NH7-4", "accession": "GCA_004519315.1", "taxid": 1524096, "species_taxid": 1524096, "relation_to_type": "type", "validated": true, "ani": 77.1598, "matched_fragments": 143, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter gotjawali", "strain": "strain=SA3-7", "accession": "GCA_002355435.1", "taxid": 1550579, "species_taxid": 1550579, "relation_to_type": "type", "validated": true, "ani": 76.7015, "matched_fragments": 187, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter gotjawali", "strain": "strain=CECT 8628", "accession": "GCA_014191635.1", "taxid": 1550579, "species_taxid": 1550579, "relation_to_type": "type", "validated": true, "ani": 76.6842, "matched_fragments": 186, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter oryzae", "strain": "strain=DSM 19975", "accession": "GCA_003148845.1", "taxid": 468058, "species_taxid": 468058, "relation_to_type": "type", "validated": true, "ani": 76.6587, "matched_fragments": 136, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter limnophilus", "strain": "strain=YBJ-36", "accession": "GCA_004005815.1", "taxid": 1932778, "species_taxid": 1932778, "relation_to_type": "type", "validated": true, "ani": 76.6525, "matched_fragments": 107, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter inviolabilis", "strain": "strain=HC2", "accession": "GCA_011089895.1", "taxid": 2714892, "species_taxid": 2714892, "relation_to_type": "type", "validated": true, "ani": 76.593, "matched_fragments": 143, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter phyllosphaerae", "strain": "strain=PP-F2FG21", "accession": "GCA_004378255.1", "taxid": 1812349, "species_taxid": 1812349, "relation_to_type": "type", "validated": true, "ani": 76.5883, "matched_fragments": 134, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter terrigena", "strain": "strain=17JY9-4", "accession": "GCA_004168255.1", "taxid": 2492395, "species_taxid": 2492395, 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