{
    "type": "genome",
    "identifier": "GCA_018267115.1",
    "organism": "Bacteroidota bacterium",
    "title": "Bacteroidota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018267115.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17573994",
        "wgs_master": "JAFDZD000000000.1",
        "refseq_category": "na",
        "taxid": "1898104",
        "species_taxid": "1898104",
        "organism_name": "Bacteroidota bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS-73",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826711v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/267/115/GCA_018267115.1_ASM1826711v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidota bacterium"
        ],
        "sample_taxid": [
            "1898104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "0.764 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 70.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2723623",
        "Number of Sequences": "210",
        "Longest Sequences (bp)": "55178",
        "N50 (bp)": "16307",
        "Gap Ratio (%)": "0.452963",
        "GCcontent (%)": "60.3",
        "Number of CDSs": "2182",
        "Average Protein Length": "325.3",
        "Coding Ratio (%)": "78.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Hymenobacter caeli",
                "strain": "strain=9A",
                "accession": "GCA_013294115.1",
                "taxid": 2735894,
                "species_taxid": 2735894,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 51,
                "total_fragments": 797,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hymenobacter terricola",
                "strain": "strain=3F2",
                "accession": "GCA_017921975.2",
                "taxid": 2819236,
                "species_taxid": 2819236,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4634,
                "matched_fragments": 53,
                "total_fragments": 797,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 70.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_018266685.1",
                "gtdb_species": "s__PHOS-HE28 sp018266685",
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                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.70",
                "min_intra_species_ani": "99.70",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
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                "gtdb_species": "s__PHOS-HE28 sp018267065",
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                "matched_fragments": 582,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018266475.1",
                "gtdb_species": "s__PHOS-HE28 sp018266475",
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                "matched_fragments": 468,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018057455.1",
                "gtdb_species": "s__PHOS-HE28 sp018057455",
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                "matched_fragments": 458,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.80",
                "min_intra_species_ani": "99.80",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016700415.1",
                "gtdb_species": "s__PHOS-HE28 sp002396605",
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                "matched_fragments": 414,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.63",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.98",
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                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_018267055.1",
                "gtdb_species": "s__PHOS-HE28 sp018267055",
                "ani": 79.3239,
                "matched_fragments": 360,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016710685.1",
                "gtdb_species": "s__PHOS-HE28 sp016710685",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.90",
                "min_intra_species_ani": "98.90",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016788485.1",
                "gtdb_species": "s__PHOS-HE28 sp016788485",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016719225.1",
                "gtdb_species": "s__PHOS-HE28 sp016719225",
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                "matched_fragments": 296,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018267155.1",
                "gtdb_species": "s__PHOS-HE28 sp018267155",
                "ani": 78.3804,
                "matched_fragments": 222,
                "total_fragments": 797,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__PHOS-HE28",
        "g__PHOS-HE28",
        "s__PHOS-HE28 sp018266685"
    ],
    "_genome_taxon": [
        "Bacteroidota",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__PHOS-HE28",
        "g__PHOS-HE28",
        "s__PHOS-HE28 sp018266685",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "PHOS-HE28",
        "PHOS-HE28",
        "PHOS-HE28",
        "sp018266685"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}