{
    "type": "genome",
    "identifier": "GCA_018267575.1",
    "organism": "Bacteroidota bacterium",
    "title": "Bacteroidota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018267575.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17573965",
        "wgs_master": "JAFDYF000000000.1",
        "refseq_category": "na",
        "taxid": "1898104",
        "species_taxid": "1898104",
        "organism_name": "Bacteroidota bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS-44",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826757v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/267/575/GCA_018267575.1_ASM1826757v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidota bacterium"
        ],
        "sample_taxid": [
            "1898104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "1.414 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4964430",
        "Number of Sequences": "116",
        "Longest Sequences (bp)": "466504",
        "N50 (bp)": "103326",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.0",
        "Number of CDSs": "4091",
        "Average Protein Length": "345.7",
        "Coding Ratio (%)": "85.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Panacibacter ginsenosidivorans",
                "strain": "strain=Gsoil1550",
                "accession": "GCA_007971225.1",
                "taxid": 1813871,
                "species_taxid": 1813871,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8885,
                "matched_fragments": 66,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea flava",
                "strain": "strain=CCUG 51397",
                "accession": "GCA_001623405.1",
                "taxid": 714549,
                "species_taxid": 714549,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 75.8399,
                "matched_fragments": 53,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraflavitalea soli",
                "strain": "strain=5GH32-13",
                "accession": "GCA_003555545.1",
                "taxid": 2315862,
                "species_taxid": 2315862,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8016,
                "matched_fragments": 61,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella koreensis",
                "strain": "strain=GR20-10",
                "accession": "GCA_000246855.1",
                "taxid": 354356,
                "species_taxid": 354356,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7311,
                "matched_fragments": 77,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella populi",
                "strain": "strain=CCTCC AB 208238",
                "accession": "GCA_002078015.1",
                "taxid": 550983,
                "species_taxid": 550983,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7116,
                "matched_fragments": 73,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella koreensis",
                "strain": "strain=DSM 17620",
                "accession": "GCA_002077985.1",
                "taxid": 354356,
                "species_taxid": 354356,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7064,
                "matched_fragments": 75,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraflavitalea devenefica",
                "strain": "strain=X16",
                "accession": "GCA_011759375.1",
                "taxid": 2716334,
                "species_taxid": 2716334,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6656,
                "matched_fragments": 80,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella soli",
                "strain": "strain=MAH-29",
                "accession": "GCA_017742245.1",
                "taxid": 2821487,
                "species_taxid": 2821487,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5647,
                "matched_fragments": 65,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudobacter ginsenosidimutans",
                "strain": "strain=DSM 18116",
                "accession": "GCA_004291315.1",
                "taxid": 661488,
                "species_taxid": 661488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4829,
                "matched_fragments": 63,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudobacter ginsenosidimutans",
                "strain": "strain=Gsoil 221",
                "accession": "GCA_007970185.1",
                "taxid": 661488,
                "species_taxid": 661488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4632,
                "matched_fragments": 62,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavihumibacter rivuli",
                "strain": "strain=IMCC34838",
                "accession": "GCA_018595685.2",
                "taxid": 2838156,
                "species_taxid": 2838156,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4594,
                "matched_fragments": 57,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavihumibacter fluminis",
                "strain": "strain=IMCC34837",
                "accession": "GCA_018595675.2",
                "taxid": 2838157,
                "species_taxid": 2838157,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.336,
                "matched_fragments": 55,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niastella caeni",
                "strain": "strain=HX-16-21",
                "accession": "GCA_004834005.1",
                "taxid": 2569763,
                "species_taxid": 2569763,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2629,
                "matched_fragments": 78,
                "total_fragments": 1597,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018267575.1",
                "gtdb_species": "s__Puia sp018267575",
                "ani": 100.0,
                "matched_fragments": 1591,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_001302245.1",
                "gtdb_species": "s__PMP191F sp001302245",
                "ani": 76.8751,
                "matched_fragments": 83,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__PMP191F",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.37",
                "min_intra_species_ani": "99.37",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018266575.1",
                "gtdb_species": "s__Puia sp018266575",
                "ani": 76.4612,
                "matched_fragments": 163,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018266455.1",
                "gtdb_species": "s__Puia sp018266455",
                "ani": 76.2834,
                "matched_fragments": 177,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903927975.1",
                "gtdb_species": "s__Puia sp903927975",
                "ani": 76.2561,
                "matched_fragments": 198,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.89",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013288945.1",
                "gtdb_species": "s__Puia sp013288945",
                "ani": 75.9988,
                "matched_fragments": 96,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016200915.1",
                "gtdb_species": "s__AWTP1-9 sp016200915",
                "ani": 75.9901,
                "matched_fragments": 68,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__AWTP1-9",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.92",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001898505.1",
                "gtdb_species": "s__Puia sp001898505",
                "ani": 75.8817,
                "matched_fragments": 64,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903906365.1",
                "gtdb_species": "s__Puia sp903906365",
                "ani": 75.8459,
                "matched_fragments": 85,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.90",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_018267615.1",
                "gtdb_species": "s__Puia sp018267615",
                "ani": 75.7878,
                "matched_fragments": 108,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Puia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003555545.1",
                "gtdb_species": "s__Paraflavitalea soli",
                "ani": 75.7812,
                "matched_fragments": 60,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Paraflavitalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_011759375.1",
                "gtdb_species": "s__Paraflavitalea devenefica",
                "ani": 75.6629,
                "matched_fragments": 78,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Paraflavitalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011357845.1",
                "gtdb_species": "s__UBA3961 sp011357845",
                "ani": 75.655,
                "matched_fragments": 67,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__UBA3961",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004118265.1",
                "gtdb_species": "s__Lacibacter luteus",
                "ani": 75.4748,
                "matched_fragments": 63,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Lacibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016703625.1",
                "gtdb_species": "s__Ferruginibacter sp016703625",
                "ani": 75.4031,
                "matched_fragments": 50,
                "total_fragments": 1597,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.77",
                "min_intra_species_ani": "96.12",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 5,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Puia",
        "s__Puia sp018267575"
    ],
    "_genome_taxon": [
        "Bacteroidota",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Puia",
        "s__Puia sp018267575",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "Puia",
        "Puia",
        "sp018267575"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}