{ "type": "genome", "identifier": "GCA_018268085.1", "organism": "Bacteroidota bacterium", "title": "Bacteroidota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018268085.1", "bioproject": "PRJNA694732", "biosample": "SAMN17573937", "wgs_master": "JAFDXE000000000.1", "refseq_category": "na", "taxid": "1898104", "species_taxid": "1898104", "organism_name": "Bacteroidota bacterium", "infraspecific_name": "", "isolate": "SZAS-16", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/04", "asm_name": "ASM1826808v1", "submitter": "The University Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/268/085/GCA_018268085.1_ASM1826808v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-04", "dateModified": "2021-05-04", "datePublished": "2021-05-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacteroidota bacterium" ], "sample_taxid": [ "1898104" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Shenzhen" ], "sample_host_location_id": [], "data_size": "1.093 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3862036", "Number of Sequences": "57", "Longest Sequences (bp)": "214844", "N50 (bp)": "107765", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "40.3", "Number of CDSs": "3109", "Average Protein Length": "358.7", "Coding Ratio (%)": "86.6", "Number of rRNAs": "1", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ferruginibacter albus", "strain": "strain=KIS38-8", "accession": "GCA_020042285.1", "taxid": 2875540, "species_taxid": 2875540, "relation_to_type": "type", "validated": true, "ani": 76.2774, "matched_fragments": 115, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Panacibacter ginsenosidivorans", "strain": "strain=Gsoil1550", "accession": "GCA_007971225.1", "taxid": 1813871, "species_taxid": 1813871, "relation_to_type": "type", "validated": true, "ani": 75.93, "matched_fragments": 61, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavihumibacter stibioxidans", "strain": "strain=YS-17", "accession": "GCA_014332695.1", "taxid": 1834163, "species_taxid": 1834163, "relation_to_type": "type", "validated": true, "ani": 75.8325, "matched_fragments": 55, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavihumibacter cheonanensis", "strain": "strain=WS16", "accession": "GCA_022352215.1", "taxid": 1442385, "species_taxid": 1442385, "relation_to_type": "type", "validated": true, "ani": 75.7519, "matched_fragments": 56, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Panacibacter microcysteis", "strain": "strain=DH6", "accession": "GCA_015831355.1", "taxid": 2793269, "species_taxid": 2793269, "relation_to_type": "type", "validated": true, "ani": 75.7302, "matched_fragments": 61, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavisolibacter ginsengisoli", "strain": "strain=DSM 18119", "accession": "GCA_900129295.1", "taxid": 462367, "species_taxid": 462367, "relation_to_type": "type", "validated": true, "ani": 75.6691, "matched_fragments": 50, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pinibacter aurantiacus", "strain": "strain=MAH-26", "accession": "GCA_019130065.1", "taxid": 2851599, "species_taxid": 2851599, "relation_to_type": "type", "validated": true, "ani": 75.6036, "matched_fragments": 71, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niastella caeni", "strain": "strain=HX-16-21", "accession": "GCA_004834005.1", "taxid": 2569763, "species_taxid": 2569763, "relation_to_type": "type", "validated": true, "ani": 75.4975, "matched_fragments": 68, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Terrimonas ferruginea", "strain": "strain=DSM 30193", "accession": "GCA_000425585.1", "taxid": 249, "species_taxid": 249, "relation_to_type": "type", "validated": true, 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