{
    "type": "genome",
    "identifier": "GCA_018268265.1",
    "organism": "Armatimonadota bacterium",
    "title": "Armatimonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018268265.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17573919",
        "wgs_master": "JAFDWW000000000.1",
        "refseq_category": "na",
        "taxid": "2033014",
        "species_taxid": "2033014",
        "organism_name": "Armatimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS-7",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826826v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/268/265/GCA_018268265.1_ASM1826826v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Armatimonadota bacterium"
        ],
        "sample_taxid": [
            "2033014"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "1.307 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4585418",
        "Number of Sequences": "82",
        "Longest Sequences (bp)": "369245",
        "N50 (bp)": "150177",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "57.0",
        "Number of CDSs": "4298",
        "Average Protein Length": "319.1",
        "Coding Ratio (%)": "89.7",
        "Number of rRNAs": "3",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Fimbriimonas ginsengisoli",
                "strain": "strain=Gsoil 348",
                "accession": "GCA_000724625.1",
                "taxid": 1005039,
                "species_taxid": 1005039,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1636,
                "matched_fragments": 96,
                "total_fragments": 1490,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016125185.1",
                "gtdb_species": "s__Fimbriimonas sp016125185",
                "ani": 97.2409,
                "matched_fragments": 1341,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.42",
                "min_intra_species_ani": "97.24",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_001898035.1",
                "gtdb_species": "s__55-13 sp001898035",
                "ani": 76.896,
                "matched_fragments": 64,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__55-13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.96",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018268355.1",
                "gtdb_species": "s__JAFDWR01 sp018268355",
                "ani": 76.6877,
                "matched_fragments": 79,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__JAFDWR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903927345.1",
                "gtdb_species": "s__Fimbriimonas sp903927345",
                "ani": 76.6762,
                "matched_fragments": 109,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016788425.1",
                "gtdb_species": "s__JAFLBD01 sp016788425",
                "ani": 76.4655,
                "matched_fragments": 56,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__JAFLBD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000724625.1",
                "gtdb_species": "s__Fimbriimonas ginsengisoli",
                "ani": 76.1636,
                "matched_fragments": 96,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903904815.1",
                "gtdb_species": "s__Fimbriimonas sp903904815",
                "ani": 75.8243,
                "matched_fragments": 61,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903927025.1",
                "gtdb_species": "s__Fimbriimonas sp903927025",
                "ani": 75.776,
                "matched_fragments": 50,
                "total_fragments": 1490,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.60",
                "min_intra_species_ani": "99.13",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 8,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Armatimonadota",
        "c__Fimbriimonadia",
        "o__Fimbriimonadales",
        "f__Fimbriimonadaceae",
        "g__Fimbriimonas",
        "s__Fimbriimonas sp016125185"
    ],
    "_genome_taxon": [
        "Armatimonadota",
        "bacterium",
        "d__Bacteria",
        "p__Armatimonadota",
        "c__Fimbriimonadia",
        "o__Fimbriimonadales",
        "f__Fimbriimonadaceae",
        "g__Fimbriimonas",
        "s__Fimbriimonas sp016125185",
        "Bacteria",
        "Armatimonadota",
        "Fimbriimonadia",
        "Fimbriimonadales",
        "Fimbriimonadaceae",
        "Fimbriimonas",
        "Fimbriimonas",
        "sp016125185"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}