{
    "type": "genome",
    "identifier": "GCA_018268595.1",
    "organism": "Actinomycetota bacterium",
    "title": "Actinomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018268595.1",
        "bioproject": "PRJNA694732",
        "biosample": "SAMN17573912",
        "wgs_master": "JAFDWH000000000.1",
        "refseq_category": "na",
        "taxid": "2900548",
        "species_taxid": "2900548",
        "organism_name": "Actinomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "SZAS-16",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/04",
        "asm_name": "ASM1826859v1",
        "submitter": "The University Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/268/595/GCA_018268595.1_ASM1826859v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-04",
    "dateModified": "2021-05-04",
    "datePublished": "2021-05-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Shenzhen"
        ],
        "sample_host_location_id": [],
        "data_size": "0.928 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3569684",
        "Number of Sequences": "31",
        "Longest Sequences (bp)": "489081",
        "N50 (bp)": "325568",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "73.2",
        "Number of CDSs": "3548",
        "Average Protein Length": "312.2",
        "Coding Ratio (%)": "93.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "59",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Conexibacter woesei",
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                "accession": "GCA_000025265.1",
                "taxid": 191495,
                "species_taxid": 191495,
                "relation_to_type": "type",
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                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Conexibacter arvalis",
                "strain": "strain=DSM 23288",
                "accession": "GCA_014199525.1",
                "taxid": 912552,
                "species_taxid": 912552,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 778,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Capillimicrobium parvum",
                "strain": "strain=0166_1",
                "accession": "GCA_021172045.1",
                "taxid": 2884022,
                "species_taxid": 2884022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4847,
                "matched_fragments": 629,
                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraconexibacter algicola",
                "strain": "strain=Seoho-28",
                "accession": "GCA_003044185.1",
                "taxid": 2133960,
                "species_taxid": 2133960,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2329,
                "matched_fragments": 595,
                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Baekduia soli",
                "strain": "strain=BR7-21",
                "accession": "GCA_007970665.1",
                "taxid": 496014,
                "species_taxid": 496014,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8803,
                "matched_fragments": 575,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solirubrobacter pauli",
                "strain": "strain=DSM 14954",
                "accession": "GCA_003633755.1",
                "taxid": 166793,
                "species_taxid": 166793,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6712,
                "matched_fragments": 588,
                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter americanus",
                "strain": "strain=DSM 16676",
                "accession": "GCA_000420025.1",
                "taxid": 588672,
                "species_taxid": 588672,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8525,
                "matched_fragments": 475,
                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Herbiconiux solani",
                "strain": "strain=NBRC 106740",
                "accession": "GCA_001571005.1",
                "taxid": 661329,
                "species_taxid": 661329,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1375,
                "matched_fragments": 186,
                "total_fragments": 1176,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 8.33,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_018268595.1",
                "gtdb_species": "s__Conexibacter sp018268595",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Conexibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_014199525.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000025265.1",
                "gtdb_species": "s__Conexibacter woesei",
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                "matched_fragments": 819,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Conexibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015655225.1",
                "gtdb_species": "s__Conexibacter sp015655225",
                "ani": 80.225,
                "matched_fragments": 464,
                "total_fragments": 1176,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Conexibacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013813955.1",
                "gtdb_species": "s__CADCVQ01 sp013813955",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__CADCVQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013815355.1",
                "gtdb_species": "s__Palsa-744 sp013815355",
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                "matched_fragments": 341,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Palsa-744",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902806175.1",
                "gtdb_species": "s__CADCVQ01 sp902806175",
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                "matched_fragments": 518,
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_000425945.1",
                "gtdb_species": "s__Solirubrobacter sp000425945",
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            },
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                "accession": "GCA_013696905.1",
                "gtdb_species": "s__JACCXP01 sp013696905",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Thermoleophilaceae;g__JACCXP01",
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                "num_clustered_genomes": 1,
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            {
                "accession": "GCA_902806215.1",
                "gtdb_species": "s__CADCVT01 sp902806215",
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                "matched_fragments": 435,
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
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        "motility": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Actinomycetota",
        "c__Thermoleophilia",
        "o__Solirubrobacterales",
        "f__Solirubrobacteraceae",
        "g__Conexibacter",
        "s__Conexibacter sp018268595"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Thermoleophilia",
        "o__Solirubrobacterales",
        "f__Solirubrobacteraceae",
        "g__Conexibacter",
        "s__Conexibacter sp018268595",
        "Bacteria",
        "Actinomycetota",
        "Thermoleophilia",
        "Solirubrobacterales",
        "Solirubrobacteraceae",
        "Conexibacter",
        "Conexibacter",
        "sp018268595"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}