{
    "type": "genome",
    "identifier": "GCA_018333895.1",
    "organism": "Truepera sp.",
    "title": "Truepera sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Utah",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018333895.1",
        "bioproject": "PRJNA672823",
        "biosample": "SAMN18877742",
        "wgs_master": "JAGXSJ000000000.1",
        "refseq_category": "na",
        "taxid": "2478917",
        "species_taxid": "2478917",
        "organism_name": "Truepera sp.",
        "infraspecific_name": "",
        "isolate": "CROMO_A_191",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/10",
        "asm_name": "ASM1833389v1",
        "submitter": "University of Utah",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/333/895/GCA_018333895.1_ASM1833389v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-10",
    "dateModified": "2021-05-10",
    "datePublished": "2021-05-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Truepera sp."
        ],
        "sample_taxid": [
            "2478917"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA:California"
        ],
        "sample_host_location_id": [],
        "data_size": "0.805 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 10.61,
        "strain_heterogeneity": 37.5,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2841736",
        "Number of Sequences": "178",
        "Longest Sequences (bp)": "90241",
        "N50 (bp)": "24758",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.9",
        "Number of CDSs": "2654",
        "Average Protein Length": "297.9",
        "Coding Ratio (%)": "83.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "5"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Truepera radiovictrix",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Calidithermus chliarophilus",
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                "accession": "GCA_000430045.1",
                "taxid": 52023,
                "species_taxid": 52023,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9621,
                "matched_fragments": 69,
                "total_fragments": 864,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanithermus profundus",
                "strain": "strain=DSM 14977",
                "accession": "GCA_000183745.1",
                "taxid": 187137,
                "species_taxid": 187137,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9335,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Calidithermus terrae",
                "strain": "strain=DSM 26712",
                "accession": "GCA_003574345.1",
                "taxid": 1408545,
                "species_taxid": 1408545,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7377,
                "matched_fragments": 71,
                "total_fragments": 864,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanithermus desulfurans",
                "strain": "strain=DSM 15757",
                "accession": "GCA_014201675.1",
                "taxid": 227924,
                "species_taxid": 227924,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7004,
                "matched_fragments": 50,
                "total_fragments": 864,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus metalli",
                "strain": "strain=DSM 27521",
                "accession": "GCA_014201805.1",
                "taxid": 1141878,
                "species_taxid": 1141878,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2161,
                "matched_fragments": 50,
                "total_fragments": 864,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 10.61,
            "strain_heterogeneity": 37.5
        },
        "gtdb_result": [
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                "accession": "GCA_018333895.1",
                "gtdb_species": "s__JAGXSJ01 sp018333895",
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                "matched_fragments": 839,
                "total_fragments": 864,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAGXSJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018333775.1",
                "gtdb_species": "s__JAGXSJ01 sp018333775",
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                "matched_fragments": 396,
                "total_fragments": 864,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAGXSJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000092425.1",
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                "total_fragments": 864,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011390455.1",
                "gtdb_species": "s__JAABTL01 sp011390455",
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                "matched_fragments": 68,
                "total_fragments": 864,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAABTL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007130855.1",
                "gtdb_species": "s__CSSed10-48 sp007130855",
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                "matched_fragments": 82,
                "total_fragments": 864,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__CSSed10-48",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.69",
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                "mean_intra_species_af": "0.91",
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                "num_clustered_genomes": 3,
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            },
            {
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_013697735.1",
                "gtdb_species": "s__SKWV01 sp013697735",
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__SKWV01",
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            },
            {
                "accession": "GCA_007695125.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__CSSed10-48",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCF_014201675.1",
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            },
            {
                "accession": "GCA_003556805.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__CSSed10-48",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_902806425.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 46.0,
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        "genome_size": 3260398.4,
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        "coding_genes": 2903.667,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 45.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
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        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "mesophilic_range_tmp": 0.0,
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        "bacillus_cell_shape": 0.0,
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        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Deinococcota",
        "c__Deinococci",
        "o__Deinococcales",
        "f__Trueperaceae",
        "g__JAGXSJ01",
        "s__JAGXSJ01 sp018333895"
    ],
    "_genome_taxon": [
        "Truepera",
        "sp.",
        "d__Bacteria",
        "p__Deinococcota",
        "c__Deinococci",
        "o__Deinococcales",
        "f__Trueperaceae",
        "g__JAGXSJ01",
        "s__JAGXSJ01 sp018333895",
        "Bacteria",
        "Deinococcota",
        "Deinococci",
        "Deinococcales",
        "Trueperaceae",
        "JAGXSJ01",
        "JAGXSJ01",
        "sp018333895"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}