{ "type": "genome", "identifier": "GCA_018335495.1", "organism": "Hydrogenophaga sp.", "title": "Hydrogenophaga sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Utah", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018335495.1", "bioproject": "PRJNA672823", "biosample": "SAMN18877709", "wgs_master": "JAGXRC000000000.1", "refseq_category": "na", "taxid": "1904254", "species_taxid": "1904254", "organism_name": "Hydrogenophaga sp.", "infraspecific_name": "", "isolate": "CROMO_A_66", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/10", "asm_name": "ASM1833549v1", "submitter": "University of Utah", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/335/495/GCA_018335495.1_ASM1833549v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-10", "dateModified": "2021-05-10", "datePublished": "2021-05-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Hydrogenophaga sp." ], "sample_taxid": [ "1904254" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA:California" ], "sample_host_location_id": [], "data_size": "0.649 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 82.29, "contamination": 0.93, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2388923", "Number of Sequences": "288", "Longest Sequences (bp)": "274600", "N50 (bp)": "8770", "Gap Ratio (%)": "0.000000", 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"validated": true, "ani": 82.9869, "matched_fragments": 489, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga pseudoflava", "strain": "strain=NBRC 102511", "accession": "GCA_001592285.1", "taxid": 47421, "species_taxid": 47421, "relation_to_type": "type", "validated": true, "ani": 82.924, "matched_fragments": 479, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga flava", "strain": "strain=NBRC 102514", "accession": "GCA_001571145.1", "taxid": 65657, "species_taxid": 65657, "relation_to_type": "type", "validated": true, "ani": 82.7052, "matched_fragments": 488, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter pinisoli", "strain": "strain=MAH-25", "accession": "GCA_009758015.1", "taxid": 2682844, "species_taxid": 2682844, "relation_to_type": "type", "validated": true, "ani": 80.8669, "matched_fragments": 383, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudorhodoferax aquiterrae", "strain": "strain=KCTC 23314", "accession": "GCA_014652235.1", "taxid": 747304, "species_taxid": 747304, "relation_to_type": "type", "validated": true, "ani": 80.3705, "matched_fragments": 413, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylophilus ampelinus", "strain": "strain=CFBP 1192", "accession": "GCA_024832295.1", "taxid": 54067, "species_taxid": 54067, "relation_to_type": "type", "validated": true, "ani": 80.3402, "matched_fragments": 341, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter agri", "strain": "strain=G-1-2-2", "accession": "GCA_012927085.1", "taxid": 2728837, "species_taxid": 2728837, "relation_to_type": "type", "validated": true, "ani": 80.1115, "matched_fragments": 408, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Variovorax gossypii", "strain": "strain=DSM 100435", "accession": "GCA_003965815.1", "taxid": 1679495, "species_taxid": 1679495, "relation_to_type": "type", "validated": true, "ani": 79.994, "matched_fragments": 318, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella dechloratans", "strain": "strain=CCUG 30977", "accession": "GCA_021049305.1", "taxid": 36863, "species_taxid": 36863, "relation_to_type": "type", "validated": true, "ani": 79.7478, "matched_fragments": 338, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax facilis", "strain": "strain=DSM 649", "accession": "GCA_023913775.1", "taxid": 12917, "species_taxid": 12917, "relation_to_type": "type", "validated": true, "ani": 79.7393, "matched_fragments": 359, "total_fragments": 676, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 82.29, 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