{ "type": "genome", "identifier": "GCA_018368215.1", "organism": "Bacillota bacterium", "title": "Bacillota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of California, Berkeley", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018368215.1", "bioproject": "PRJNA698986", "biosample": "SAMN17800767", "wgs_master": "JAGZEQ000000000.1", "refseq_category": "na", "taxid": "1879010", "species_taxid": "1879010", "organism_name": "Bacillota bacterium", "infraspecific_name": "", "isolate": "L3_079_000M1_dasL3_079_000M1_concoct_86", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/16", "asm_name": "ASM1836821v1", "submitter": "University of California, Berkeley", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/368/215/GCA_018368215.1_ASM1836821v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-16", "dateModified": "2021-05-16", "datePublished": "2021-05-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Bacillota bacterium" ], "sample_taxid": [ "1879010" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Pittsburgh, Magee-Womens Hospital of UPMC" ], "sample_host_location_id": [], "data_size": "0.674 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": 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"below_threshold" }, { "organism_name": "Anaerostipes caccae", "strain": "strain=JCM 13470", "accession": "GCA_014467075.1", "taxid": 105841, "species_taxid": 105841, "relation_to_type": "type", "validated": true, "ani": 77.9706, "matched_fragments": 92, "total_fragments": 780, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerostipes rhamnosivorans", "strain": "strain=1y2", "accession": "GCA_005280655.1", "taxid": 1229621, "species_taxid": 1229621, "relation_to_type": "type", "validated": true, "ani": 77.6881, "matched_fragments": 92, "total_fragments": 780, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprococcus phoceensis", "strain": "strain=Marseille-P3062", "accession": "GCA_900104635.1", "taxid": 1870993, "species_taxid": 1870993, "relation_to_type": "type", "validated": true, "ani": 77.6129, "matched_fragments": 50, "total_fragments": 780, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blautia 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