{
    "type": "genome",
    "identifier": "GCA_018371335.1",
    "organism": "Sutterella sp.",
    "title": "Sutterella sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018371335.1",
        "bioproject": "PRJNA698986",
        "biosample": "SAMN17801615",
        "wgs_master": "JAHALG000000000.1",
        "refseq_category": "na",
        "taxid": "1981025",
        "species_taxid": "1981025",
        "organism_name": "Sutterella sp.",
        "infraspecific_name": "",
        "isolate": "L3_072_000M1_dasL3_072_000M1_concoct_51",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/16",
        "asm_name": "ASM1837133v1",
        "submitter": "University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/371/335/GCA_018371335.1_ASM1837133v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-16",
    "dateModified": "2021-05-16",
    "datePublished": "2021-05-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sutterella sp."
        ],
        "sample_taxid": [
            "1981025"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Pittsburgh, Magee-Womens Hospital of UPMC"
        ],
        "sample_host_location_id": [],
        "data_size": "0.603 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2116985",
        "Number of Sequences": "126",
        "Longest Sequences (bp)": "79427",
        "N50 (bp)": "25928",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.9",
        "Number of CDSs": "1907",
        "Average Protein Length": "319.0",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Duodenibacillus massiliensis",
                "strain": "strain=Marseille-P2968",
                "accession": "GCA_900128485.1",
                "taxid": 1852381,
                "species_taxid": 1852381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.7054,
                "matched_fragments": 593,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Sutterella parvirubra",
                "strain": "strain=YIT 11816",
                "accession": "GCA_000250875.1",
                "taxid": 437898,
                "species_taxid": 437898,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7063,
                "matched_fragments": 95,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutterella megalosphaeroides",
                "strain": "strain=6FBBBH3",
                "accession": "GCA_003609995.1",
                "taxid": 2494234,
                "species_taxid": 2494234,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4769,
                "matched_fragments": 113,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutterella faecalis",
                "strain": "strain=KGMB03119",
                "accession": "GCA_006337085.1",
                "taxid": 2584944,
                "species_taxid": 2584944,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4208,
                "matched_fragments": 110,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutterella wadsworthensis",
                "strain": "strain=DSM 14016",
                "accession": "GCA_003315195.1",
                "taxid": 40545,
                "species_taxid": 40545,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2542,
                "matched_fragments": 72,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutterella wadsworthensis",
                "strain": "strain=FDAARGOS_1159",
                "accession": "GCA_016724805.1",
                "taxid": 40545,
                "species_taxid": 40545,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2197,
                "matched_fragments": 73,
                "total_fragments": 642,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_900128485.1",
                "gtdb_species": "s__Duodenibacillus massiliensis",
                "ani": 98.7054,
                "matched_fragments": 593,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.48",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 8,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900544255.1",
                "gtdb_species": "s__Duodenibacillus sp900544255",
                "ani": 79.433,
                "matched_fragments": 234,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.25",
                "min_intra_species_ani": "96.77",
                "mean_intra_species_af": "0.84",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900762555.1",
                "gtdb_species": "s__Duodenibacillus sp900762555",
                "ani": 79.0564,
                "matched_fragments": 216,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003472385.1",
                "gtdb_species": "s__Duodenibacillus intestinigallinarum",
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                "matched_fragments": 163,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.80",
                "min_intra_species_ani": "98.31",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_900315045.1",
                "gtdb_species": "s__Duodenibacillus sp900315045",
                "ani": 78.6627,
                "matched_fragments": 121,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.77",
                "min_intra_species_ani": "97.52",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCA_900767875.1",
                "gtdb_species": "s__Duodenibacillus sp900767875",
                "ani": 78.6416,
                "matched_fragments": 190,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900552915.1",
                "gtdb_species": "s__Duodenibacillus sp900552915",
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                "matched_fragments": 142,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.20",
                "min_intra_species_ani": "98.20",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900538905.1",
                "gtdb_species": "s__Duodenibacillus intestinavium",
                "ani": 78.5272,
                "matched_fragments": 149,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.77",
                "min_intra_species_ani": "96.85",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900552545.1",
                "gtdb_species": "s__Duodenibacillus sp900552545",
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                "matched_fragments": 184,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.45",
                "min_intra_species_ani": "98.39",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_009183815.1",
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                "matched_fragments": 119,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Sutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.09",
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            },
            {
                "accession": "GCA_900543805.1",
                "gtdb_species": "s__Sutterella merdavium",
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                "matched_fragments": 107,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Sutterella",
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                "mean_intra_species_ani": "98.29",
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                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017628205.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006337085.1",
                "gtdb_species": "s__Sutterella faecalis",
                "ani": 77.4721,
                "matched_fragments": 108,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Sutterella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "97.93",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900544335.1",
                "gtdb_species": "s__Duodenibacillus sp900544335",
                "ani": 76.831,
                "matched_fragments": 60,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Duodenibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.18",
                "min_intra_species_ani": "97.92",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.155,
        "cell_length": 0.079,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 2592017.625,
        "gc_content": 58.295,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.5,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.5,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
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        "f__Burkholderiaceae",
        "g__Duodenibacillus",
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    ],
    "_genome_taxon": [
        "Sutterella",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__Duodenibacillus",
        "s__Duodenibacillus massiliensis",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "Duodenibacillus",
        "Duodenibacillus",
        "massiliensis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}