{
    "type": "genome",
    "identifier": "GCA_018371925.1",
    "organism": "Coriobacteriaceae bacterium",
    "title": "Coriobacteriaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018371925.1",
        "bioproject": "PRJNA698986",
        "biosample": "SAMN17801583",
        "wgs_master": "JAHAKA000000000.1",
        "refseq_category": "na",
        "taxid": "2011094",
        "species_taxid": "2011094",
        "organism_name": "Coriobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "L3_108_103G1_dasL3_108_103G1_concoct_59_sub",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/16",
        "asm_name": "ASM1837192v1",
        "submitter": "University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/371/925/GCA_018371925.1_ASM1837192v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-16",
    "dateModified": "2021-05-16",
    "datePublished": "2021-05-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Coriobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "2011094"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Pittsburgh, Magee-Womens Hospital of UPMC"
        ],
        "sample_host_location_id": [],
        "data_size": "0.532 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1848273",
        "Number of Sequences": "30",
        "Longest Sequences (bp)": "262040",
        "N50 (bp)": "126853",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.9",
        "Number of CDSs": "1628",
        "Average Protein Length": "331.8",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Olegusella massiliensis",
                "strain": "strain=KHD7",
                "accession": "GCA_900078545.1",
                "taxid": 1776381,
                "species_taxid": 1776381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.9392,
                "matched_fragments": 533,
                "total_fragments": 601,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_900078545.1",
                "gtdb_species": "s__Olegusella massiliensis",
                "ani": 97.9392,
                "matched_fragments": 533,
                "total_fragments": 601,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olegusella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.70",
                "min_intra_species_ani": "97.94",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000466405.1",
                "gtdb_species": "s__Olegusella sp000466405",
                "ani": 89.3882,
                "matched_fragments": 476,
                "total_fragments": 601,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olegusella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.435,
        "cell_length": 0.089,
        "doubling_h": null,
        "growth_tmp": 36.125,
        "optimum_tmp": 36.142,
        "optimum_ph": 7.233,
        "genome_size": 2293139.966,
        "gc_content": 61.955,
        "coding_genes": 1736.778,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 50.333,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Coriobacteriia",
        "o__Coriobacteriales",
        "f__Atopobiaceae",
        "g__Olegusella",
        "s__Olegusella massiliensis"
    ],
    "_genome_taxon": [
        "Coriobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Coriobacteriia",
        "o__Coriobacteriales",
        "f__Atopobiaceae",
        "g__Olegusella",
        "s__Olegusella massiliensis",
        "Bacteria",
        "Actinomycetota",
        "Coriobacteriia",
        "Coriobacteriales",
        "Atopobiaceae",
        "Olegusella",
        "Olegusella",
        "massiliensis"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}