{ "type": "genome", "identifier": "GCA_018375295.1", "organism": "Lachnospira eligens", "title": "Lachnospira eligens", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of California, Berkeley", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018375295.1", "bioproject": "PRJNA698986", "biosample": "SAMN17801413", "wgs_master": "JAHADM000000000.1", "refseq_category": "na", "taxid": "39485", "species_taxid": "39485", "organism_name": "Lachnospira eligens", "infraspecific_name": "", "isolate": "L2_040_225G1_dasL2_040_225G1_concoct_30", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/16", "asm_name": "ASM1837529v1", "submitter": "University of California, Berkeley", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/375/295/GCA_018375295.1_ASM1837529v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-16", "dateModified": "2021-05-16", "datePublished": "2021-05-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Lachnospira eligens" ], "sample_taxid": [ "39485" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Pittsburgh, Magee-Womens Hospital of UPMC" ], "sample_host_location_id": [], "data_size": "0.816 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2913705", "Number of Sequences": 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88431, "relation_to_type": "type", "validated": true, "ani": 76.8665, "matched_fragments": 52, "total_fragments": 943, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerobutyricum hallii", "strain": "strain=DSM 3353", "accession": "GCA_000173975.1", "taxid": 39488, "species_taxid": 39488, "relation_to_type": "type", "validated": true, "ani": 76.8141, "matched_fragments": 67, "total_fragments": 943, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Clostridium] fimetarium", "strain": "strain=DSM 9179", "accession": "GCA_900111235.1", "taxid": 99656, "species_taxid": 99656, "relation_to_type": "type", "validated": true, "ani": 76.698, "matched_fragments": 58, "total_fragments": 943, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eubacterium uniforme", "strain": "strain=ATCC 35992", "accession": "GCA_900167115.1", "taxid": 39495, "species_taxid": 39495, "relation_to_type": "type", "validated": true, "ani": 76.4876, 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