{
    "type": "genome",
    "identifier": "GCA_018382335.1",
    "organism": "Dysgonomonas mossii",
    "title": "Dysgonomonas mossii",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018382335.1",
        "bioproject": "PRJNA698986",
        "biosample": "SAMN17801067",
        "wgs_master": "JAGZQE000000000.1",
        "refseq_category": "na",
        "taxid": "163665",
        "species_taxid": "163665",
        "organism_name": "Dysgonomonas mossii",
        "infraspecific_name": "",
        "isolate": "L2_023_246G1_dasL2_023_246G1_concoct_43",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/17",
        "asm_name": "ASM1838233v1",
        "submitter": "University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/382/335/GCA_018382335.1_ASM1838233v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-17",
    "dateModified": "2021-05-17",
    "datePublished": "2021-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Dysgonomonas mossii"
        ],
        "sample_taxid": [
            "163665"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Pittsburgh, Magee-Womens Hospital of UPMC"
        ],
        "sample_host_location_id": [],
        "data_size": "1.077 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3791859",
        "Number of Sequences": "41",
        "Longest Sequences (bp)": "452799",
        "N50 (bp)": "335048",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.4",
        "Number of CDSs": "3133",
        "Average Protein Length": "355.5",
        "Coding Ratio (%)": "88.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_000213575.1",
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                "relation_to_type": "suspected-type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "accession": "GCA_000376405.1",
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                "matched_fragments": 1054,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysgonomonas gadei",
                "strain": "strain=ATCC BAA-286",
                "accession": "GCA_000213555.1",
                "taxid": 156974,
                "species_taxid": 156974,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3267,
                "matched_fragments": 295,
                "total_fragments": 1240,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysgonomonas hofstadii",
                "strain": "strain=DSM 104969",
                "accession": "GCA_014196915.1",
                "taxid": 637886,
                "species_taxid": 637886,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9508,
                "matched_fragments": 217,
                "total_fragments": 1240,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysgonomonas macrotermitis",
                "strain": "strain=DSM 27370",
                "accession": "GCA_900128985.1",
                "taxid": 1346286,
                "species_taxid": 1346286,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5195,
                "matched_fragments": 114,
                "total_fragments": 1240,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysgonomonas alginatilytica",
                "strain": "strain=DSM 100214",
                "accession": "GCA_003201355.1",
                "taxid": 1605892,
                "species_taxid": 1605892,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6732,
                "matched_fragments": 122,
                "total_fragments": 1240,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dysgonomonas massiliensis",
                "strain": "strain=Marseille-P4356",
                "accession": "GCA_900240225.1",
                "taxid": 2040292,
                "species_taxid": 2040292,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6145,
                "matched_fragments": 107,
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                "ani_threshold": 95,
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        "cc_result": {
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            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCF_004569505.1",
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                "total_fragments": 1240,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Dysgonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.42",
                "min_intra_species_ani": "95.88",
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                "num_clustered_genomes": 11,
                "status": "conclusive"
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                "accession": "GCF_000213575.1",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002482385.1",
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                "matched_fragments": 287,
                "total_fragments": 1240,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Dysgonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900079725.1",
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                "matched_fragments": 281,
                "total_fragments": 1240,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Dysgonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_010501055.1",
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                "matched_fragments": 396,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Dysgonomonas",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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            {
                "accession": "GCF_001261735.1",
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                "matched_fragments": 236,
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            {
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            },
            {
                "accession": "GCF_900343125.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
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        "growth_tmp": 37.0,
        "optimum_tmp": 32.5,
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        "genome_size": 3951265.0,
        "gc_content": 37.47,
        "coding_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
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        "range_salinity": null,
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        "aerobic_respiration": 0.0,
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        "bacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
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        "s__Dysgonomonas sp900079735"
    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Dysgonomonadaceae",
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        "s__Dysgonomonas sp900079735",
        "Bacteria",
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        "Bacteroidia",
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        "Dysgonomonadaceae",
        "Dysgonomonas",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}