{
    "type": "genome",
    "identifier": "GCA_018385095.1",
    "organism": "Bacteroidaceae bacterium",
    "title": "Bacteroidaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Quadram Institute BioScience",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018385095.1",
        "bioproject": "PRJNA672868",
        "biosample": "SAMN18905526",
        "wgs_master": "JAHAXS000000000.1",
        "refseq_category": "na",
        "taxid": "2212467",
        "species_taxid": "2212467",
        "organism_name": "Bacteroidaceae bacterium",
        "infraspecific_name": "",
        "isolate": "150",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/17",
        "asm_name": "ASM1838509v1",
        "submitter": "Quadram Institute BioScience",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/385/095/GCA_018385095.1_ASM1838509v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-17",
    "dateModified": "2021-05-17",
    "datePublished": "2021-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidaceae bacterium"
        ],
        "sample_taxid": [
            "2212467"
        ],
        "sample_host_organism": [
            "pig"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom: Sparsholt, Hampshire"
        ],
        "sample_host_location_id": [],
        "data_size": "0.600 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 70.94,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2081807",
        "Number of Sequences": "432",
        "Longest Sequences (bp)": "34435",
        "N50 (bp)": "6161",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.8",
        "Number of CDSs": "1295",
        "Average Protein Length": "364.0",
        "Coding Ratio (%)": "67.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 70.94,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_900766785.1",
                "gtdb_species": "s__UBA4372 sp900766785",
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                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.88",
                "min_intra_species_ani": "97.64",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 8,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900543815.1",
                "gtdb_species": "s__UBA4372 sp900543815",
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                "matched_fragments": 281,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.82",
                "min_intra_species_ani": "97.58",
                "mean_intra_species_af": "0.92",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_002316015.1",
                "gtdb_species": "s__UBA4372 sp002316015",
                "ani": 78.3649,
                "matched_fragments": 218,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.56",
                "min_intra_species_ani": "99.28",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_902775385.1",
                "gtdb_species": "s__UBA4372 sp902775385",
                "ani": 77.2087,
                "matched_fragments": 71,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902799985.1",
                "gtdb_species": "s__UBA4372 sp902799985",
                "ani": 77.0527,
                "matched_fragments": 67,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.87",
                "min_intra_species_ani": "97.87",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017379075.1",
                "gtdb_species": "s__UBA4372 sp017379075",
                "ani": 76.9627,
                "matched_fragments": 78,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.81",
                "min_intra_species_ani": "95.71",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017559845.1",
                "gtdb_species": "s__UBA4372 sp017559845",
                "ani": 76.8677,
                "matched_fragments": 78,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002394305.1",
                "gtdb_species": "s__UBA4372 sp002394305",
                "ani": 76.8527,
                "matched_fragments": 56,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.13",
                "min_intra_species_ani": "97.13",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017469525.1",
                "gtdb_species": "s__UBA4372 sp017469525",
                "ani": 76.7432,
                "matched_fragments": 75,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.07",
                "min_intra_species_ani": "96.85",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017619585.1",
                "gtdb_species": "s__UBA4372 sp017619585",
                "ani": 76.3911,
                "matched_fragments": 69,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004559785.1",
                "gtdb_species": "s__UBA4372 sp004559785",
                "ani": 76.1623,
                "matched_fragments": 50,
                "total_fragments": 460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__UBA4372",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.149,
        "cell_length": 0.21,
        "doubling_h": -0.095,
        "growth_tmp": 36.675,
        "optimum_tmp": 36.026,
        "optimum_ph": 6.997,
        "genome_size": 4766044.241,
        "gc_content": 43.414,
        "coding_genes": 3969.717,
        "rRNA16S_genes": 5.5,
        "tRNA_genes": 71.066,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__UBA4372",
        "s__UBA4372 sp900766785"
    ],
    "_genome_taxon": [
        "Bacteroidaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Bacteroidaceae",
        "g__UBA4372",
        "s__UBA4372 sp900766785",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Bacteroidaceae",
        "UBA4372",
        "UBA4372",
        "sp900766785"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}