{
    "type": "genome",
    "identifier": "GCA_018399255.1",
    "organism": "Spirochaetales bacterium",
    "title": "Spirochaetales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Academia Sinica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018399255.1",
        "bioproject": "PRJNA721826",
        "biosample": "SAMN19006072",
        "wgs_master": "JAGYPA000000000.1",
        "refseq_category": "na",
        "taxid": "2026792",
        "species_taxid": "2026792",
        "organism_name": "Spirochaetales bacterium",
        "infraspecific_name": "",
        "isolate": "M55B182",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/19",
        "asm_name": "ASM1839925v1",
        "submitter": "Academia Sinica",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/399/255/GCA_018399255.1_ASM1839925v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-19",
    "dateModified": "2021-05-19",
    "datePublished": "2021-05-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Spirochaetales bacterium"
        ],
        "sample_taxid": [
            "2026792"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Republic of Khakassia, Shirinsky District, Lake Shunet"
        ],
        "sample_host_location_id": [],
        "data_size": "1.256 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4395521",
        "Number of Sequences": "246",
        "Longest Sequences (bp)": "260437",
        "N50 (bp)": "52237",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.0",
        "Number of CDSs": "3739",
        "Average Protein Length": "315.6",
        "Coding Ratio (%)": "80.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018399255.1",
                "gtdb_species": "s__M55B182 sp018399255",
                "ani": 100.0,
                "matched_fragments": 1321,
                "total_fragments": 1329,
                "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__JABMQR01;f__JABMQR01;g__M55B182",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_013202335.1",
                "gtdb_species": "s__JABMQR01 sp013202335",
                "ani": 75.976,
                "matched_fragments": 56,
                "total_fragments": 1329,
                "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__JABMQR01;f__JABMQR01;g__JABMQR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.587,
        "cell_length": 0.858,
        "doubling_h": 0.794,
        "growth_tmp": 34.127,
        "optimum_tmp": 35.522,
        "optimum_ph": 7.957,
        "genome_size": 2488028.97,
        "gc_content": 38.889,
        "coding_genes": 1921.24,
        "rRNA16S_genes": 1.734,
        "tRNA_genes": 38.681,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.863,
        "range_salinity": 0.666,
        "facultative_respiration": 0.033,
        "anaerobic_respiration": 0.716,
        "aerobic_respiration": 0.25,
        "mesophilic_range_tmp": 0.913,
        "thermophilic_range_tmp": 0.043,
        "psychrophilic_range_tmp": 0.043,
        "bacillus_cell_shape": 0.046,
        "coccus_cell_shape": 0.069,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.023,
        "spiral_cell_shape": 0.86
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Spirochaetota",
        "c__Spirochaetia",
        "o__JABMQR01",
        "f__JABMQR01",
        "g__M55B182",
        "s__M55B182 sp018399255"
    ],
    "_genome_taxon": [
        "Spirochaetales",
        "bacterium",
        "d__Bacteria",
        "p__Spirochaetota",
        "c__Spirochaetia",
        "o__JABMQR01",
        "f__JABMQR01",
        "g__M55B182",
        "s__M55B182 sp018399255",
        "Bacteria",
        "Spirochaetota",
        "Spirochaetia",
        "JABMQR01",
        "JABMQR01",
        "M55B182",
        "M55B182",
        "sp018399255"
    ],
    "_meo": [
        {
            "id": "MEO_0000177",
            "label": "salt lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}