{
    "type": "genome",
    "identifier": "GCA_018401085.1",
    "organism": "Priestia megaterium",
    "title": "Priestia megaterium",
    "description": "derived from metagenome; fragmented assembly; genome length too small",
    "data type": "Genome sequencing and assembly",
    "organization": "Academia Sinica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018401085.1",
        "bioproject": "PRJNA721826",
        "biosample": "SAMN19005976",
        "wgs_master": "JAGYLI000000000.1",
        "refseq_category": "na",
        "taxid": "1404",
        "species_taxid": "1404",
        "organism_name": "Priestia megaterium",
        "infraspecific_name": "",
        "isolate": "M50B89",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/19",
        "asm_name": "ASM1840108v1",
        "submitter": "Academia Sinica",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/401/085/GCA_018401085.1_ASM1840108v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genome length too small",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-19",
    "dateModified": "2021-05-19",
    "datePublished": "2021-05-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Priestia megaterium"
        ],
        "sample_taxid": [
            "1404"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Republic of Khakassia, Shirinsky District, Lake Shunet"
        ],
        "sample_host_location_id": [],
        "data_size": "0.738 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2505974",
        "Number of Sequences": "936",
        "Longest Sequences (bp)": "17206",
        "N50 (bp)": "2747",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.6",
        "Number of CDSs": "1910",
        "Average Protein Length": "246.8",
        "Coding Ratio (%)": "56.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "5",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=ATCC 14581",
                "accession": "GCA_900113355.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 98.1255,
                "matched_fragments": 272,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=ATCC 14581",
                "accession": "GCA_006094495.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8442,
                "matched_fragments": 273,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=ATCC 14581",
                "accession": "GCA_017086525.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8442,
                "matched_fragments": 273,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=NCTC10342",
                "accession": "GCA_900445485.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8442,
                "matched_fragments": 273,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=ATCC 14581",
                "accession": "GCA_000832985.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8442,
                "matched_fragments": 273,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia megaterium",
                "strain": "strain=NBRC 15308",
                "accession": "GCA_001591525.1",
                "taxid": 1404,
                "species_taxid": 1404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 97.8422,
                "matched_fragments": 273,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Priestia aryabhattai",
                "strain": "strain=B8W22",
                "accession": "GCA_000956595.1",
                "taxid": 412384,
                "species_taxid": 412384,
                "relation_to_type": "type",
                "validated": true,
                "ani": 96.7292,
                "matched_fragments": 272,
                "total_fragments": 284,
                "ani_threshold": 95,
                "status": "inconclusive"
            }
        ],
        "cc_result": {
            "completeness": 66.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000832985.1",
                "gtdb_species": "s__Priestia megaterium",
                "ani": 97.8442,
                "matched_fragments": 273,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 95.5311,
                "mean_intra_species_ani": "96.82",
                "min_intra_species_ani": "95.69",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 151,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_000956595.1",
                "gtdb_species": "s__Priestia aryabhattai",
                "ani": 96.7292,
                "matched_fragments": 272,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 96.022,
                "mean_intra_species_ani": "97.07",
                "min_intra_species_ani": "96.58",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 12,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_009497655.1",
                "gtdb_species": "s__Priestia megaterium_A",
                "ani": 96.6131,
                "matched_fragments": 273,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 96.022,
                "mean_intra_species_ani": "98.08",
                "min_intra_species_ani": "96.36",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 34,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_008180335.1",
                "gtdb_species": "s__Priestia megaterium_B",
                "ani": 80.388,
                "matched_fragments": 146,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002265635.1",
                "gtdb_species": "s__Priestia aryabhattai_A",
                "ani": 80.0268,
                "matched_fragments": 127,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.53",
                "min_intra_species_ani": "98.16",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_001591565.1",
                "gtdb_species": "s__Priestia flexa",
                "ani": 79.5837,
                "matched_fragments": 134,
                "total_fragments": 284,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_H;g__Priestia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.12",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 15,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Bacillales",
        "f__Bacillaceae_H",
        "g__Priestia",
        "s__Priestia megaterium_C"
    ],
    "_genome_taxon": [
        "Priestia",
        "megaterium",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Bacillales",
        "f__Bacillaceae_H",
        "g__Priestia",
        "s__Priestia megaterium_C",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "Bacillales",
        "Bacillaceae",
        "H",
        "Priestia",
        "Priestia",
        "megaterium",
        "C"
    ],
    "_meo": [
        {
            "id": "MEO_0000177",
            "label": "salt lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}