# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00020	sequence01:3267..3488(+)	frameshift,internal_stop_codon	3462..3464(+)	3488,3443,3620,3731,3593,3641	WP_003411662.1	NADH-quinone oxidoreductase subunit NuoH	76.7	19.4	52.3
MGA_5	LOCUS_00040	sequence01:5691..7046(+)	frameshift		6914	WP_003097681.1	NADH-quinone oxidoreductase subunit L	87.6	64.7	58.8
MGA_6	LOCUS_00050	sequence01:7058..7537(+)	frameshift		6938	WP_011815943.1	NADH-quinone oxidoreductase subunit L	86.8	22.5	33.8
MGA_9	LOCUS_00080	sequence01:10684..10998(+)	frameshift,internal_stop_codon	11123..11125(+)	10992,11275,11164,11191	WP_014207203.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	86.5	25.2	42.2
MGA_11	LOCUS_00100	sequence01:11276..11719(+)	frameshift,internal_stop_codon	11123..11125(+)	11200,11170,11275	WP_003109958.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	91.8	39.7	59.3
MGA_21	LOCUS_00200	sequence01:20099..21763(+)	partial			WP_003163304.1	motility hub landmark protein FimV	63.5	39.9	33.4
MGA_31	LOCUS_00300	sequence01:30608..30856(-)	partial			WP_001295580.1	stress response translation initiation inhibitor YciH	95.1	72.2	66.7
MGA_35	LOCUS_00340	sequence01:35655..36224(-)	partial			WP_003021659.1	DUF4381 domain-containing protein	62.4	70.9	31.1
MGA_59	LOCUS_00580	sequence01:72247..74076(+)	partial			WP_152615065.1	DNA internalization-related competence protein ComEC/Rec2	98.7	72.3	33.2
MGA_68	LOCUS_00670	sequence01:81775..82296(-)	partial			WP_011024458.1	protease inhibitor I42 family protein	54.3	33.2	29.8
MGA_78	LOCUS_00770	sequence01:93339..94427(-)	partial			WP_013226303.1	alpha/beta hydrolase	70.7	77.1	33.0
MGA_128	LOCUS_01270	sequence01:142011..143084(-)	partial			WP_003104126.1	DNA polymerase III subunit delta'	56.9	60.7	42.4
MGA_164	LOCUS_01630	sequence01:180044..181399(-)	frameshift		179776,180055	WP_011268680.1	ATP-dependent RNA helicase HrpA	98.2	34.0	52.1
MGA_165	LOCUS_01640	sequence01:181672..182013(-)	frameshift,internal_stop_codon	181584..181586(-)	181673,182012	WP_011038068.1	ATP-dependent RNA helicase HrpA	99.1	8.2	67.0
MGA_175	LOCUS_01740	sequence01:189511..191202(-)	partial			WP_003114673.1	DNA polymerase III subunit gamma/tau	78.0	66.1	56.8
MGA_176	LOCUS_01750	sequence01:191493..193388(-)	partial			WP_162491174.1	membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	94.3	74.7	33.5
MGA_194	LOCUS_01920	sequence01:212253..213803(+)	partial			WP_010921242.1	peptide MFS transporter	76.7	68.4	40.2
MGA_219	LOCUS_02170	sequence01:239292..241541(+)	frameshift		241517	WP_014206955.1	insulinase family protein	93.5	70.7	46.5
MGA_220	LOCUS_02180	sequence01:241610..242257(+)	frameshift		241523	WP_014206955.1	insulinase family protein	87.4	19.1	48.9
MGA_224	LOCUS_02220	sequence01:246628..248394(-)	partial			WP_003405868.1	cell division protein ZipA	26.5	54.4	42.0
MGA_239	LOCUS_02370	sequence01:267312..267731(-)	partial			WP_008572623.1	helix-hairpin-helix domain-containing protein	46.8	52.4	50.8
MGA_246	LOCUS_02440	sequence01:274419..275273(-)	partial			WP_004190098.1	prephenate dehydratase	91.2	66.9	43.2
MGA_252	LOCUS_02500	sequence01:281938..282711(-)	partial			WP_003113439.1	23S rRNA pseudouridine(2605) synthase RluB	92.6	61.9	60.7
MGA_265	LOCUS_02630	sequence01:293463..293735(-)	partial			WP_011268400.1	cytochrome c-type biogenesis protein CcmH	85.6	50.0	43.0
MGA_278	LOCUS_02760	sequence01:306931..307533(+)	partial			WP_011072472.1	electron transport complex subunit RsxB	70.5	72.5	58.2
MGA_279	LOCUS_02770	sequence01:307530..308204(+)	partial			WP_002210597.1	electron transport complex subunit RsxC	50.4	16.3	31.9
MGA_308	LOCUS_03060	sequence01:343674..344600(+)	partial			WP_003087308.1	cytochrome-c oxidase, cbb3-type subunit III	28.9	29.2	38.5
MGA_321	LOCUS_03190	sequence01:357614..358393(+)	partial			WP_003119510.1	hypothetical protein	76.1	71.2	30.5
MGA_322	LOCUS_03200	sequence01:358541..359974(+)	partial			WP_164922210.1	redoxin domain-containing protein	81.6	62.1	26.6
MGA_336	LOCUS_03340	sequence01:371801..372667(-)	partial			WP_005768963.1	ABC transporter permease	78.8	74.3	26.8
MGA_342	LOCUS_03400	sequence01:377613..>378137(-)	partial			WP_003087843.1	outer membrane porin OprF	92.0	44.6	52.5
MGA_349	LOCUS_03470	sequence02:5759..7279(-)	frameshift		7299	WP_206819543.1	M13 family metallopeptidase	99.0	73.8	51.8
MGA_350	LOCUS_03480	sequence02:7228..7845(-)	frameshift		7266	WP_011070840.1	M13 family metallopeptidase	78.0	23.3	37.7
MGA_351	LOCUS_03490	sequence02:7998..11378(-)	partial			WP_011072403.1	TonB-dependent receptor	23.2	30.5	33.5
MGA_352	LOCUS_03500	sequence02:11690..15052(-)	partial			WP_011072403.1	TonB-dependent receptor	17.9	23.3	41.5
MGA_382	LOCUS_03800	sequence02:50285..51514(+)	partial			WP_008672241.1	M28 family peptidase	84.8	35.0	51.5
MGA_386	LOCUS_03840	sequence02:58686..59501(-)	partial			WP_178372678.1	TonB-dependent receptor	91.9	30.2	37.5
MGA_387	LOCUS_03850	sequence02:59509..61044(-)	partial			WP_178372678.1	TonB-dependent receptor	89.8	51.7	29.1
MGA_400	LOCUS_03980	sequence02:72078..73358(+)	partial			WP_011084168.1	phospholipase	45.5	52.1	25.5
MGA_401	LOCUS_03990	sequence02:73451..74647(+)	partial			WP_187436936.1	peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein	37.4	42.7	27.2
MGA_410	LOCUS_04080	sequence02:82517..83977(+)	frameshift		84039,84009,83818,83933,83982	WP_003895174.1	PQQ-dependent methanol/ethanol family dehydrogenase	84.8	75.2	42.0
MGA_422	LOCUS_04200	sequence02:94955..95428(-)	partial			WP_011036724.1	MOSC domain-containing protein	84.7	74.8	32.8
MGA_425	LOCUS_04230	sequence02:98081..98557(-)	partial			WP_011204847.1	CHRD domain-containing protein	73.4	80.6	30.2
MGA_447	LOCUS_04450	sequence02:125706..126554(+)	partial			WP_099260625.1	DUF4159 domain-containing protein	78.7	66.1	37.2
MGA_468	LOCUS_04660	sequence02:146812..147690(+)	partial			WP_118792797.1	cytochrome-c oxidase, cbb3-type subunit III	95.9	65.2	37.3
MGA_469	LOCUS_04670	sequence02:147734..148759(-)	partial			WP_236615531.1	NAD(P)-binding protein	96.2	39.7	31.2
MGA_471	LOCUS_04690	sequence02:151658..154549(-)	partial			WP_010920997.1	TonB-dependent receptor	24.7	25.3	33.2
MGA_475	LOCUS_04730	sequence02:157587..157871(+)	partial			WP_011038881.1	CPXCG motif-containing cysteine-rich protein	57.4	83.1	48.1
MGA_481	LOCUS_04790	sequence02:164553..165059(+)	partial			WP_005421140.1	30S ribosomal protein S6	60.7	81.0	72.5
MGA_494	LOCUS_04920	sequence02:177331..178314(-)	partial			WP_003113961.1	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	96.9	41.4	54.6
MGA_526	LOCUS_05240	sequence02:210259..210720(+)	partial			WP_003245702.1	dipeptide ABC transporter permease DppC	57.5	24.4	35.2
MGA_530	LOCUS_05280	sequence02:212080..212661(+)	frameshift		212065	WP_003232615.1	dipeptide ABC transporter ATP-binding subunit DppD	87.0	48.4	58.3
MGA_533	LOCUS_05310	sequence02:214113..215150(-)	partial			WP_011084260.1	sterol desaturase family protein	63.8	80.7	26.4
MGA_539	LOCUS_05370	sequence02:222989..223228(+)	partial			WP_011106349.1	glutamate synthase-related protein	98.7	15.2	44.9
MGA_541	LOCUS_05390	sequence02:224103..225059(-)	partial			WP_011084260.1	sterol desaturase family protein	69.5	82.9	27.2
MGA_549	LOCUS_05470	sequence02:235509..236927(-)	partial			WP_010943656.1	acyl-[ACP]--phospholipid O-acyltransferase	96.4	41.4	38.6
MGA_573	LOCUS_05700	sequence03:24538..25092(-)	internal_stop_codon	25114..25116(-)		WP_010887304.1	protein disulfide isomerase FrnE	85.9	66.3	32.3
MGA_597	LOCUS_05940	sequence03:53750..54088(-)	partial			WP_011038732.1	Lrp/AsnC ligand binding domain-containing protein	98.2	69.2	62.7
MGA_603	LOCUS_06000	sequence03:61889..62359(+)	partial			WP_004187731.1	SET domain-containing protein-lysine N-methyltransferase	82.1	74.4	50.0
MGA_620	LOCUS_06170	sequence03:82087..82926(+)	internal_stop_codon	82924..82926(+)		WP_024265653.1	TonB-dependent receptor	89.2	22.3	39.6
MGA_621	LOCUS_06180	sequence03:82945..85035(+)	internal_stop_codon	82924..82926(+)		WP_024265653.1	TonB-dependent receptor	99.1	65.0	33.2
MGA_626	LOCUS_06230	sequence03:89834..90997(+)	partial			WP_003113320.1	multidrug efflux RND transporter periplasmic adaptor subunit MuxA	61.8	57.5	26.6
MGA_633	LOCUS_06300	sequence03:99518..110410(+)	partial			WP_164925919.1	MSHA biogenesis protein MshQ	19.9	54.4	26.1
MGA_636	LOCUS_06330	sequence03:114115..114480(+)	internal_stop_codon	114478..114480(+)		WP_011023349.1	class I SAM-dependent methyltransferase	93.4	37.7	36.1
MGA_652	LOCUS_06490	sequence03:129131..130102(+)	partial			WP_011073818.1	MSHA biogenesis protein MshI1	63.5	68.2	30.0
MGA_663	LOCUS_06600	sequence03:139897..140520(+)	partial			WP_011073808.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	68.1	72.2	34.2
MGA_676	LOCUS_06730	sequence03:152567..152767(-)	partial			WP_000508972.1	Sec-independent protein translocase subunit TatA	80.3	58.3	58.5
MGA_685	LOCUS_06800	sequence04:3152..4411(+)	partial			WP_007331975.1	DUF1501 domain-containing protein	30.5	27.2	29.7
MGA_709	LOCUS_07040	sequence04:38004..43358(+)	partial			WP_003147933.1	DEAD/DEAH box helicase	63.0	71.8	42.1
MGA_715	LOCUS_07100	sequence04:48229..50622(+)	partial			WP_165448192.1	calcium-binding protein	30.4	52.2	39.1
MGA_734	LOCUS_07290	sequence04:65679..66374(+)	partial			WP_003404333.1	flagellar hook assembly protein FlgD	72.3	72.5	37.1
MGA_735	LOCUS_07300	sequence04:66392..69331(+)	partial			WP_011037113.1	flagellar hook protein FlgE	24.8	58.5	43.3
MGA_741	LOCUS_07360	sequence04:73339..76269(+)	partial			WP_015704937.1	flagellar hook-associated protein FlgK	44.4	78.3	27.9
MGA_750	LOCUS_07450	sequence04:83406..83939(-)	frameshift		83956	WP_010947931.1	Dot/Icm type IV secretion system effector LpnE	83.1	39.5	32.4
MGA_754	LOCUS_07490	sequence04:87313..87636(-)	partial			WP_000079759.1	flagellin FliC	75.7	23.2	63.0
MGA_755	LOCUS_07500	sequence04:88027..89295(+)	partial			WP_011262363.1	sigma-54 dependent transcriptional regulator	97.2	73.4	41.8
MGA_758	LOCUS_07530	sequence04:91300..91941(+)	partial			WP_010947070.1	flagellin	71.8	33.3	45.6
MGA_759	LOCUS_07540	sequence04:92325..92693(+)	partial			WP_011337967.1	flagellin	82.0	20.3	45.0
MGA_762	LOCUS_07570	sequence04:95504..96529(+)	partial			WP_011706626.1	sigma-54 dependent transcriptional regulator	95.3	70.9	48.6
MGA_772	LOCUS_07670	sequence04:106615..106971(+)	partial			WP_003083049.1	flagellar motor switch protein FliN	85.6	62.4	57.4
MGA_782	LOCUS_07770	sequence04:114193..115431(+)	partial			WP_037392152.1	sulfite oxidase	71.1	64.4	34.5
MGA_793	LOCUS_07880	sequence04:127085..127384(-)	partial			WP_011071818.1	4a-hydroxytetrahydrobiopterin dehydratase	80.8	71.4	61.2
MGA_808	LOCUS_08030	sequence04:139877..144160(-)	partial			WP_011035843.1	glycosyltransferase family 4 protein	27.1	84.2	35.2
MGA_819	LOCUS_08120	sequence05:320..1570(-)	partial			WP_011072834.1	SO2930 family diheme c-type cytochrome	74.0	37.0	38.5
MGA_829	LOCUS_08220	sequence05:9676..10203(+)	partial			WP_010973883.1	SLC13 family permease	81.1	24.1	52.8
MGA_848	LOCUS_08410	sequence05:30102..32306(+)	partial			WP_003120244.1	lytic transglycosylase domain-containing protein	49.6	68.0	29.9
MGA_852	LOCUS_08450	sequence05:35456..36190(+)	partial			WP_011975120.1	NUDIX hydrolase	61.1	76.9	30.9
MGA_853	LOCUS_08460	sequence05:36356..39910(+)	partial			WP_099263491.1	circumsporozoite protein- membrane associated protein	32.8	34.9	24.3
MGA_855	LOCUS_08480	sequence05:42258..43298(+)	partial			WP_053061227.1	hypothetical protein	65.9	63.0	33.7
MGA_857	LOCUS_08500	sequence05:46122..46955(+)	partial			WP_099260625.1	DUF4159 domain-containing protein	77.3	61.7	35.5
MGA_869	LOCUS_08620	sequence05:63461..64603(+)	partial			WP_010881170.1	MBL fold metallo-hydrolase	73.2	76.4	28.7
MGA_912	LOCUS_09050	sequence05:105741..107105(+)	partial			WP_011073190.1	type IV pilus biogenesis/stability protein PilW	44.1	75.6	26.7
MGA_928	LOCUS_09210	sequence05:124733..125425(+)	partial			WP_013368469.1	RidA family protein	50.4	76.4	38.2
MGA_929	LOCUS_09220	sequence05:125481..126173(-)	partial			WP_091833874.1	DsbA family protein	66.5	82.2	37.8
MGA_934	LOCUS_09270	sequence05:130911..131348(-)	partial			WP_024503807.1	FixH family protein	47.6	47.0	44.3
MGA_936	LOCUS_09290	sequence05:131955..133061(-)	partial			WP_046116578.1	HupE/UreJ family protein	46.7	48.0	43.6
MGA_979	LOCUS_09710	sequence06:41097..43982(+)	frameshift		43949	WP_003098578.1	DNA polymerase III subunit alpha	95.5	79.9	61.5
MGA_980	LOCUS_09720	sequence06:43979..44683(+)	frameshift		43949	WP_003098578.1	DNA polymerase III subunit alpha	100.0	17.6	39.7
MGA_1028	LOCUS_10200	sequence06:91189..92058(+)	partial			WP_003112574.1	cell envelope integrity protein TolA	33.6	28.0	43.3
MGA_1033	LOCUS_10250	sequence06:95626..95811(+)	frameshift,internal_stop_codon	96093..96095(+)	95847,95943,96001,95799	WP_015443906.1	7-cyano-7-deazaguanine synthase QueC	80.3	21.5	65.3
MGA_1042	LOCUS_10340	sequence06:104780..105337(-)	partial			WP_010966554.1	leucine-rich repeat domain-containing protein	62.7	12.8	33.3
MGA_1047	LOCUS_10380	sequence07:1210..1980(-)	partial			WP_011393190.1	betaine/proline/choline family ABC transporter ATP-binding protein	91.4	62.0	55.1
MGA_1052	LOCUS_10430	sequence07:6038..6310(+)	partial			WP_011117815.1	YkgJ family cysteine cluster protein	91.1	49.1	39.0
MGA_1067	LOCUS_10580	sequence07:17741..18181(+)	partial			WP_011073582.1	peptidylprolyl isomerase	61.0	44.1	48.4
MGA_1069	LOCUS_10600	sequence07:18711..19886(-)	partial			WP_011023741.1	PKD domain-containing protein	60.9	41.4	28.4
MGA_1075	LOCUS_10660	sequence07:25696..26886(-)	partial			WP_011087563.1	hydrolase	60.9	75.1	33.9
MGA_1081	LOCUS_10720	sequence07:31767..32615(-)	partial			WP_011074019.1	DUF3014 domain-containing protein	70.9	66.7	34.0
MGA_1083	LOCUS_10740	sequence07:33099..33317(-)	internal_stop_codon	33099..33101(-)		WP_003976435.1	peroxiredoxin	59.7	28.3	58.1
MGA_1092	LOCUS_10830	sequence07:44426..45553(+)	partial			WP_173668732.1	S41 family peptidase	74.1	65.6	26.8
MGA_1099	LOCUS_10900	sequence07:50353..50598(-)	frameshift		50648	WP_011089986.1	SDR family oxidoreductase	75.3	23.1	52.5
MGA_1100	LOCUS_10910	sequence07:50595..51164(-)	frameshift		50642	WP_010889454.1	SDR family NAD(P)-dependent oxidoreductase	93.7	61.9	52.5
MGA_1101	LOCUS_10920	sequence07:51517..52764(+)	partial			WP_162470598.1	TonB-dependent receptor	34.9	22.2	33.8
MGA_1108	LOCUS_10990	sequence07:57928..58974(-)	partial			WP_016328090.1	trypsin-like serine protease	61.5	74.8	24.8
MGA_1117	LOCUS_11080	sequence07:67335..67997(-)	partial			WP_008765612.1	phosphatidylinositol-4-phosphate 5-kinase	86.4	49.9	32.2
MGA_1118	LOCUS_11090	sequence07:68021..70801(-)	partial			WP_003122524.1	ABC transporter permease	60.2	66.6	36.2
MGA_1126	LOCUS_11170	sequence07:76962..78107(+)	partial			WP_093953830.1	esterase	31.0	17.7	31.6
MGA_1149	LOCUS_11400	sequence08:134..2062(+)	partial			WP_013095459.1	phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase	78.8	65.0	32.4
MGA_1155	LOCUS_11460	sequence08:8814..9068(+)	partial			WP_037388632.1	isoprenylcysteine carboxylmethyltransferase family protein	94.0	49.4	39.2
MGA_1165	LOCUS_11560	sequence08:20096..20824(-)	partial			WP_024941345.1	envelope stress response membrane protein PspC	24.0	43.3	46.6
MGA_1184	LOCUS_11750	sequence08:37301..38101(+)	partial			WP_004406382.1	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	74.8	81.3	38.5
MGA_1204	LOCUS_11950	sequence08:62643..63488(+)	partial			WP_209238565.1	MBL fold metallo-hydrolase	79.0	63.7	37.0
MGA_1205	LOCUS_11960	sequence08:63884..64528(+)	partial			WP_002220370.1	transcriptional regulator	60.7	65.7	44.6
MGA_1208	LOCUS_11990	sequence08:64933..65460(-)	internal_stop_codon	64933..64935(-)		WP_011085352.1	glycine reductase	99.4	58.3	36.9
MGA_1215	LOCUS_12060	sequence08:75539..76711(+)	partial			WP_011122720.1	tetratricopeptide repeat-containing glycosyltransferase family protein	37.4	23.0	25.3
MGA_1220	LOCUS_12110	sequence08:80797..81849(+)	frameshift		80794,80779,80827,80766	WP_003094758.1	Obg family GTPase CgtA	92.3	79.8	57.7
MGA_1225	LOCUS_12160	sequence08:85765..86331(-)	partial			WP_014344509.1	elongation factor P-like protein YeiP	100.0	70.8	43.9
MGA_1234	LOCUS_12250	sequence08:93780..95447(+)	partial			WP_010940275.1	radical SAM protein	62.9	70.1	24.5
MGA_1235	LOCUS_12260	sequence08:95409..95810(-)	frameshift		95913,95958	WP_011106102.1	MATE family efflux transporter	86.5	25.0	33.9
MGA_1236	LOCUS_12270	sequence08:95713..96813(-)	frameshift		95961,95913	WP_011704803.1	MATE family efflux transporter	74.9	58.4	41.2
MGA_1243	LOCUS_12340	sequence09:937..1230(+)	partial			WP_003106504.1	membrane protein insertion efficiency factor YidD	64.9	73.3	63.5
MGA_1269	LOCUS_12600	sequence09:28651..29646(+)	frameshift		28661	WP_011832356.1	GNAT family N-acetyltransferase	97.9	80.6	46.9
MGA_1274	LOCUS_12650	sequence09:35328..36491(+)	partial			WP_011388011.1	M48 family metallopeptidase	69.5	75.0	30.2
MGA_1290	LOCUS_12810	sequence09:52778..53137(-)	partial			WP_003096602.1	DNA-directed RNA polymerase subunit omega	54.6	73.9	69.2
MGA_1300	LOCUS_12910	sequence09:61207..61716(-)	frameshift,internal_stop_codon	61207..61209(-)	61702	WP_175628128.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	95.3	40.0	46.3
MGA_1301	LOCUS_12920	sequence09:61640..62398(-)	frameshift		61702	WP_003114358.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	92.1	57.7	61.6
MGA_1312	LOCUS_13030	sequence09:70424..71461(-)	partial			WP_003084508.1	permease-like cell division protein FtsX	79.1	71.9	29.2
MGA_1326	LOCUS_13170	sequence09:86435..87262(+)	partial			WP_011118102.1	MotA/TolQ/ExbB proton channel family protein	59.6	36.3	31.5
MGA_1339	LOCUS_13290	sequence10:4928..5602(-)	frameshift		5606	WP_176742093.1	alpha/beta hydrolase domain-containing protein	94.6	44.0	31.3
MGA_1340	LOCUS_13300	sequence10:5490..6371(-)	frameshift		5612	WP_176742093.1	alpha/beta hydrolase domain-containing protein	82.6	50.0	37.7
MGA_1344	LOCUS_13340	sequence10:10214..12769(-)	partial			WP_010940703.1	Tol-Pal system beta propeller repeat protein TolB	28.2	48.6	29.0
MGA_1385	LOCUS_13750	sequence10:41336..41719(-)	frameshift		41825,41377,41724,41576,41770,41291,41325,41261,41935,41616,41402,41916	WP_005771609.1	elongation factor Tu	86.6	27.2	50.0
MGA_1386	LOCUS_13760	sequence10:42117..42353(-)	frameshift		42065,42131,42119,42040,41916,41932	WP_003115146.1	elongation factor Tu	94.9	18.6	83.8
MGA_1398	LOCUS_13880	sequence10:58687..58899(-)	frameshift		58626,58468,58504,58538,59118,58575,58864,58716,58749,58910	WP_005480487.1	elongation factor Tu	71.4	12.7	74.0
MGA_1399	LOCUS_13890	sequence10:58908..59120(-)	frameshift		58625,59332,59117,58866,58748,59256,58715,59292,58909	WP_003115146.1	elongation factor Tu	97.1	17.6	57.5
MGA_1400	LOCUS_13900	sequence10:59005..59376(-)	frameshift		59074,59332,59497,59117,58865,59442,58747,59414,59256,59035,59292,58908	WP_011036121.1	elongation factor Tu	79.7	25.5	57.3
MGA_1403	LOCUS_13930	sequence10:61209..62051(-)	partial			WP_011262797.1	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	87.5	72.3	43.5
MGA_1406	LOCUS_13960	sequence10:65893..67296(-)	partial			WP_046116578.1	HupE/UreJ family protein	31.5	44.7	41.8
MGA_1411	LOCUS_14010	sequence10:73016..74149(+)	frameshift,internal_stop_codon	72810..72812(+)	72981,72933,72887	WP_118838626.1	amidohydrolase	97.3	67.2	45.0
MGA_1418	LOCUS_14070	sequence11:723..1307(-)	partial			WP_011036769.1	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	80.4	71.6	48.7
MGA_1440	LOCUS_14290	sequence11:24670..25122(+)	partial			WP_003106665.1	cold-shock protein	68.7	51.5	56.2
MGA_1455	LOCUS_14440	sequence11:41216..42229(-)	partial			WP_005303575.1	peptidylprolyl isomerase	44.5	79.8	41.8
MGA_1456	LOCUS_14450	sequence11:42404..43870(+)	partial			WP_010919351.1	Hsp70 family protein	71.7	76.9	27.1
MGA_1481	LOCUS_14700	sequence11:68833..69267(-)	partial			WP_010946938.1	HPF/RaiA family ribosome-associated protein	71.5	54.2	41.7
MGA_1483	LOCUS_14720	sequence11:69882..70445(-)	partial			WP_139327997.1	D-alanyl-D-alanine carboxypeptidase family protein	88.8	61.1	47.0
MGA_1485	LOCUS_14730	sequence12:1..627(+)	partial			WP_002211122.1	bifunctional aldolase/short-chain dehydrogenase	96.6	28.8	37.1
MGA_1501	LOCUS_14890	sequence12:17308..18687(+)	partial			WP_011405075.1	DUF4105 domain-containing protein	70.2	73.9	30.3
MGA_1502	LOCUS_14900	sequence12:18744..19748(+)	partial			WP_013230588.1	alpha/beta hydrolase	70.4	67.4	42.4
MGA_1524	LOCUS_15120	sequence12:42138..43070(+)	partial			WP_038967065.1	class D beta-lactamase	52.3	60.7	44.6
MGA_1530	LOCUS_15180	sequence12:49173..50270(-)	partial			WP_062784820.1	S1/P1 nuclease	59.7	63.2	30.6
MGA_1532	LOCUS_15200	sequence12:50979..51731(-)	partial			WP_011205105.1	branched-chain amino acid ABC transporter ATP-binding protein/permease	96.8	31.2	47.9
MGA_1533	LOCUS_15210	sequence12:51728..52963(-)	partial			WP_011203894.1	branched-chain amino acid ABC transporter ATP-binding protein/permease	77.9	41.3	40.2
MGA_1535	LOCUS_15230	sequence12:53918..54910(-)	frameshift		54935	WP_004196429.1	branched-chain amino acid ABC transporter substrate-binding protein	99.4	77.9	42.2
MGA_1550	LOCUS_15380	sequence12:68011..69195(-)	partial			WP_010979765.1	fumarylacetoacetate hydrolase family protein	60.2	77.6	36.3
MGA_1552	LOCUS_15400	sequence12:70625..71503(+)	partial			WP_011123135.1	VTT domain-containing protein	83.6	41.3	35.4
MGA_1572	LOCUS_15590	sequence13:20114..21496(+)	partial			WP_164922210.1	redoxin domain-containing protein	79.8	62.1	34.0
MGA_1573	LOCUS_15600	sequence13:22211..22660(-)	partial			WP_010920798.1	limonene-1,2-epoxide hydrolase family protein	71.8	83.7	31.5
MGA_1586	LOCUS_15730	sequence13:39607..41094(+)	partial			WP_011121863.1	thioredoxin family protein	78.2	60.4	26.6
MGA_1604	LOCUS_15910	sequence14:171..2039(+)	partial			WP_003401422.1	chromosomal replication initiator protein DnaA	61.1	74.4	74.2
MGA_1614	LOCUS_16010	sequence14:15228..15530(-)	frameshift		15696,15306,15180,15534	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	87.0	20.3	54.5
MGA_1615	LOCUS_16020	sequence14:15756..16436(-)	frameshift		15674,15533,15806	WP_011266131.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	88.9	42.6	45.6
MGA_1627	LOCUS_16140	sequence14:26645..28018(-)	partial			WP_010969990.1	cytochrome c oxidase subunit II	57.5	83.8	58.2
MGA_1633	LOCUS_16200	sequence14:33291..35030(+)	frameshift		35112,34988,35221,35164	WP_010945860.1	DNA polymerase I	94.3	56.7	46.5
MGA_1634	LOCUS_16210	sequence14:35407..35574(+)	frameshift,internal_stop_codon	35391..35393(+)	35233,35553,35525,35335,35816,35498,35725,35662,35797,35164	WP_010958446.1	DNA polymerase I	87.3	5.3	56.2
MGA_1635	LOCUS_16220	sequence14:35846..36094(+)	frameshift		35816,35722,35797,35662	WP_003114123.1	DNA polymerase I	100.0	8.9	59.8
MGA_1650	LOCUS_16370	sequence14:50021..50827(-)	partial			WP_012257609.1	ABC transporter permease	94.0	41.9	34.7
MGA_1652	LOCUS_16390	sequence14:50955..51677(+)	partial			WP_010868662.1	PIG-L family deacetylase	71.2	71.5	29.8
MGA_1654	LOCUS_16410	sequence14:52370..53179(-)	frameshift		53224,53191,53239	WP_011266725.1	TolC family outer membrane protein	97.8	56.1	29.9
MGA_1657	LOCUS_16440	sequence14:55472..55876(-)	frameshift		56075,56123	WP_003082539.1	alkaline protease secretion ATP-binding protein AprD	90.3	20.4	60.3
MGA_1658	LOCUS_16450	sequence14:56979..57176(-)	frameshift,internal_stop_codon	56922..56924(-)	56768,56795,56996,56879	WP_013533172.1	type I secretion system permease/ATPase	72.3	8.3	55.3
MGA_1696	LOCUS_16800	sequence15:38627..39148(+)	partial			WP_011962362.1	DUF4301 family protein	93.6	23.3	34.9
MGA_1726	LOCUS_17090	sequence16:20190..21023(+)	partial			WP_011104888.1	iron-sulfur cluster carrier protein ApbC	97.5	74.2	59.3
MGA_1727	LOCUS_17100	sequence16:21095..22765(+)	partial			WP_118838694.1	sodium:alanine symporter family protein	94.6	69.6	40.8
MGA_1730	LOCUS_17130	sequence16:24928..25491(-)	partial			WP_011707625.1	ribosome biogenesis factor YjgA	74.3	72.4	37.1
MGA_1765	LOCUS_17470	sequence17:2..637(+)	partial			WP_003114068.1	beta-ketoacyl-ACP synthase FabY	85.3	28.2	44.4
MGA_1768	LOCUS_17500	sequence17:3252..3986(-)	partial			WP_011087915.1	DnaJ domain-containing protein	59.0	60.2	42.7
MGA_1786	LOCUS_17680	sequence17:22616..22894(+)	frameshift		22548,22581	WP_001135134.1	carboxylating nicotinate-nucleotide diphosphorylase	94.6	29.3	60.9
MGA_1795	LOCUS_17770	sequence17:28106..28285(+)	partial			WP_003381207.1	DNA gyrase inhibitor YacG	86.4	73.9	62.7
MGA_1796	LOCUS_17780	sequence17:28310..28711(-)	partial			WP_011104999.1	Nudix family hydrolase	95.5	40.2	55.1
MGA_1803	LOCUS_17850	sequence17:37462..38229(-)	partial			WP_003094118.1	cell division protein FtsQ/DivIB	76.9	68.6	39.6
MGA_1818	LOCUS_17980	sequence18:567..2060(-)	frameshift		2107	WP_003411788.1	RNA polymerase sigma factor RpoD	100.0	83.6	68.9
MGA_1819	LOCUS_17990	sequence18:2033..2374(-)	frameshift		2107	WP_003085035.1	RNA polymerase sigma factor RpoD	72.6	12.8	68.3
MGA_1843	LOCUS_18230	sequence18:27003..27209(-)	internal_stop_codon	27312..27314(-)		WP_005614181.1	cAMP-activated global transcriptional regulator CRP	72.1	22.9	79.6
MGA_1850	LOCUS_18300	sequence18:33222..33971(-)	partial			WP_011105208.1	DUF3426 domain-containing protein	66.7	36.0	32.5
MGA_1855	LOCUS_18350	sequence18:37523..38047(-)	partial			WP_011815414.1	protein-disulfide reductase DsbD	86.8	24.7	33.6
MGA_1867	LOCUS_18470	sequence19:4960..5415(-)	partial			WP_011173792.1	polymer-forming cytoskeletal protein	67.5	79.7	34.0
MGA_1878	LOCUS_18580	sequence19:17005..17361(+)	partial			WP_003400155.1	outer membrane protein assembly factor BamE	95.8	65.3	58.8
MGA_1883	LOCUS_18630	sequence19:21469..21831(-)	partial			WP_003095218.1	RnfH family protein	74.2	83.2	47.2
MGA_1913	LOCUS_18930	sequence20:4989..7040(-)	partial			WP_011117769.1	ATP-binding protein	80.1	57.9	28.5
MGA_1916	LOCUS_18960	sequence20:8983..10371(-)	partial			WP_011144200.1	VCBS repeat-containing protein	56.1	22.5	25.3
MGA_1921	LOCUS_19010	sequence20:16071..17144(+)	partial			WP_011083636.1	helix-turn-helix domain-containing protein	61.9	62.9	35.0
MGA_1923	LOCUS_19030	sequence20:17958..18551(+)	partial			WP_010968939.1	hypothetical protein	60.9	76.7	31.1
MGA_1928	LOCUS_19080	sequence20:20612..24166(-)	partial			WP_011262585.1	response regulator	42.8	45.8	34.7
MGA_1932	LOCUS_19120	sequence20:28593..29435(+)	partial			WP_003120380.1	exopolyphosphatase	88.9	48.8	37.1
MGA_1953	LOCUS_19320	sequence21:13507..14526(-)	partial			WP_011250419.1	polyprenyl synthetase family protein	71.7	72.9	28.8
MGA_1962	LOCUS_19410	sequence21:26252..29272(+)	partial			WP_011072403.1	TonB-dependent receptor	23.5	28.3	31.1
MGA_1965	LOCUS_19440	sequence21:31940..33133(-)	frameshift		31969	WP_003114363.1	D-arabinono-1,4-lactone oxidase	88.7	80.1	44.6
MGA_1995	LOCUS_19740	sequence22:29313..29891(-)	frameshift		29345,29293,29247	WP_003594318.1	ABC transporter ATP-binding protein	81.2	47.9	32.7
MGA_1997	LOCUS_19760	sequence22:33538..35115(+)	partial			WP_164922069.1	hypothetical protein	37.3	19.7	31.5
MGA_1998	LOCUS_19770	sequence22:35172..37250(+)	partial			WP_011228370.1	efflux RND transporter periplasmic adaptor subunit	33.1	47.1	27.8
MGA_2002	LOCUS_19800	sequence23:1..566(+)	partial			WP_015444186.1	SulP family inorganic anion transporter	96.3	35.0	47.2
MGA_2021	LOCUS_19990	sequence23:20684..21163(+)	internal_stop_codon	21161..21163(+)		WP_172607919.1	c-type cytochrome	61.6	32.8	46.9
MGA_2022	LOCUS_20000	sequence23:21236..21586(+)	partial			WP_011262871.1	cytochrome c5 family protein	65.5	54.8	47.4
MGA_2044	LOCUS_20220	sequence24:6230..7516(+)	partial			WP_164922210.1	redoxin domain-containing protein	91.1	63.2	26.1
MGA_2048	LOCUS_20260	sequence24:10313..10552(+)	frameshift		10495,10630,10538,10587,10799	WP_011389659.1	SulP family inorganic anion transporter	73.4	10.3	69.0
MGA_2050	LOCUS_20280	sequence24:11184..11480(+)	frameshift,internal_stop_codon	11105..11107(+)	11298,11524,11419,11261,11633,10965,11001,11067,10907,11257,11582	WP_011389659.1	SulP family inorganic anion transporter	93.9	16.5	44.2
MGA_2057	LOCUS_20350	sequence24:18968..20296(-)	partial			WP_164922210.1	redoxin domain-containing protein	89.6	64.3	25.7
MGA_2067	LOCUS_20440	sequence25:1..880(+)	partial			WP_011140959.1	aromatic ring-hydroxylating dioxygenase subunit alpha	99.0	61.9	24.3
MGA_2074	LOCUS_20510	sequence25:4497..4898(+)	frameshift		4492	WP_003113918.1	alpha/beta fold hydrolase	92.5	60.2	50.0
MGA_2085	LOCUS_20620	sequence25:17726..18802(-)	partial			WP_038965351.1	peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein	64.8	63.0	29.2
MGA_2101	LOCUS_20770	sequence26:7257..9515(+)	partial			WP_011704583.1	zinc-dependent metalloprotease	32.0	55.7	35.5
MGA_2108	LOCUS_20840	sequence26:18682..18984(+)	partial			WP_003113583.1	DUF1289 domain-containing protein	95.0	61.3	29.5
MGA_2114	LOCUS_20890	sequence27:1..884(+)	partial			WP_010920343.1	MFS transporter	99.0	68.7	32.8
MGA_2131	LOCUS_21060	sequence27:21686..22573(-)	partial			WP_003417210.1	PHB depolymerase family esterase	75.3	70.7	27.8
MGA_2142	LOCUS_21150	sequence28:9187..10056(+)	partial			WP_010946662.1	type IV pilus assembly protein PilM	97.6	68.4	24.7
MGA_2149	LOCUS_21220	sequence28:16002..18017(+)	partial			WP_011706964.1	SPOR domain-containing protein	29.4	30.8	26.9
MGA_2162	LOCUS_21330	sequence29:6990..7991(-)	partial			WP_010902763.1	FkbM family methyltransferase	40.2	54.2	31.7
MGA_2184	LOCUS_21530	sequence30:9026..10612(-)	partial			WP_118838450.1	hypothetical protein	99.8	67.1	33.0
MGA_2200	LOCUS_21670	sequence31:11065..11727(-)	frameshift		11163	WP_010920346.1	2OG-Fe(II) oxygenase family protein	83.2	74.1	33.3
MGA_2211	LOCUS_21760	sequence32:6276..7550(+)	partial			WP_037391635.1	Gfo/Idh/MocA family oxidoreductase	71.9	82.4	25.7
MGA_2221	LOCUS_21840	sequence33:2433..3035(-)	partial			WP_014206995.1	protein tyrosine phosphatase family protein	72.5	83.9	28.1
MGA_2224	LOCUS_21870	sequence33:4032..4865(-)	partial			WP_147373209.1	methionyl-tRNA formyltransferase	56.7	51.3	27.3
MGA_2228	LOCUS_21910	sequence33:6780..7169(+)	partial			WP_010918974.1	cytochrome c	65.9	65.4	41.2
MGA_2231	LOCUS_21940	sequence33:11277..12380(-)	partial			WP_024265693.1	phytase	91.3	48.3	40.1
MGA_2234	LOCUS_21970	sequence34:1..596(+)	partial			WP_013530633.1	SDR family oxidoreductase	87.3	71.9	41.7
MGA_2240	LOCUS_22030	sequence34:5972..6547(-)	partial			WP_011038690.1	YceI family protein	84.8	74.6	28.5
MGA_2244	LOCUS_22070	sequence34:10716..11489(-)	partial			WP_013227981.1	DUF2306 domain-containing protein	65.8	75.5	33.9
MGA_2256	LOCUS_22180	sequence36:1..845(+)	partial			WP_005811125.1	L-lactate permease	98.2	45.6	59.0
MGA_2268	LOCUS_22280	sequence37:5857..6885(+)	partial			WP_000671775.1	alkaline phosphatase D family protein	92.4	66.8	27.2
MGA_2274	LOCUS_22330	sequence38:4539..5363(+)	partial			WP_011266465.1	lipopolysaccharide kinase InaA family protein	75.2	42.0	33.3
MGA_2280	LOCUS_22370	sequence39:4159..4992(+)	partial			WP_064496475.1	phosphatase PAP2 family protein	57.8	48.1	32.9
MGA_2281	LOCUS_22380	sequence39:5280..5708(+)	partial			WP_003022565.1	phosphatase PAP2 family protein	76.1	53.2	39.5
MGA_2283	LOCUS_22400	sequence40:1..895(+)	partial			WP_011072834.1	SO2930 family diheme c-type cytochrome	92.9	30.4	37.7
MGA_2293	LOCUS_22490	sequence41:2402..>4586(-)	partial			WP_010895700.1	YdbH domain-containing protein	30.3	25.3	26.8
MGA_2300	LOCUS_22560	sequence43:3696..>4434(-)	partial			WP_004186431.1	lipid A export permease/ATP-binding protein MsbA	91.4	37.2	60.3
MGA_2310	LOCUS_22640	sequence46:159..821(+)	partial			WP_013384321.1	DUF1080 domain-containing protein	97.7	74.7	53.0
MGA_2331	LOCUS_22790	sequence50:369..863(-)	partial			WP_010918233.1	tyrosine recombinase XerC	98.2	50.7	30.3
MGA_2338	LOCUS_22850	sequence51:2070..2975(-)	partial			WP_011085275.1	DUF4375 domain-containing protein	70.4	53.1	26.1
MGA_2354	LOCUS_22940	sequence58:1..894(+)	partial			WP_011336941.1	acyltransferase	89.2	73.4	28.6
MGA_2361	LOCUS_22990	sequence61:795..>1915(-)	partial			WP_002163445.1	PfkB family carbohydrate kinase	100.0	72.3	34.9
MGA_2377	LOCUS_23080	sequence68:773..>1388(-)	partial			WP_162275493.1	DUF4272 domain-containing protein	92.6	56.7	25.9
MGA_2380	LOCUS_23100	sequence69:536..>1346(-)	partial			WP_003110600.1	A/G-specific adenine glycosylase	98.5	73.5	51.5
