{ "type": "genome", "identifier": "GCA_018402285.1", "organism": "Hyphomonas sp.", "title": "Hyphomonas sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Academia Sinica", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018402285.1", "bioproject": "PRJNA721826", "biosample": "SAMN19005923", "wgs_master": "JAGYJH000000000.1", "refseq_category": "na", "taxid": "87", "species_taxid": "87", "organism_name": "Hyphomonas sp.", "infraspecific_name": "", "isolate": "M30B36", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/19", "asm_name": "ASM1840228v1", "submitter": "Academia Sinica", "gbrs_paired_asm": "GCF_018402285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/402/285/GCA_018402285.1_ASM1840228v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-19", "dateModified": "2021-05-19", "datePublished": "2021-05-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Hyphomonas sp." ], "sample_taxid": [ "87" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Russia: Republic of Khakassia, Shirinsky District, Lake Shunet" ], "sample_host_location_id": [], "data_size": "0.848 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3036537", "Number of Sequences": "6", "Longest Sequences (bp)": "1470098", "N50 (bp)": "627277", "Gap Ratio (%)": 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{ "organism_name": "Shinella granuli", "strain": "strain=DSM 18401", "accession": "GCA_004341885.1", "taxid": 323621, "species_taxid": 323621, "relation_to_type": "type", "validated": true, "ani": 76.1954, "matched_fragments": 93, "total_fragments": 1010, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ciceribacter ferrooxidans", "strain": "strain=F8825", "accession": "GCA_004137355.1", "taxid": 2509717, "species_taxid": 2509717, "relation_to_type": "type", "validated": true, "ani": 76.1058, "matched_fragments": 60, "total_fragments": 1010, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibius marinus", "strain": "strain=NBU2595", "accession": "GCA_014925385.1", "taxid": 2762760, "species_taxid": 2762760, "relation_to_type": "type", "validated": true, "ani": 75.969, "matched_fragments": 64, "total_fragments": 1010, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Starkeya novella", "strain": "strain=DSM 506", 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