{
    "type": "genome",
    "identifier": "GCA_018402295.1",
    "organism": "Pontimonas sp.",
    "title": "Pontimonas sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Academia Sinica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018402295.1",
        "bioproject": "PRJNA721826",
        "biosample": "SAMN19005924",
        "wgs_master": "JAGYJI000000000.1",
        "refseq_category": "na",
        "taxid": "2304492",
        "species_taxid": "2304492",
        "organism_name": "Pontimonas sp.",
        "infraspecific_name": "",
        "isolate": "M30B37",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/19",
        "asm_name": "ASM1840229v1",
        "submitter": "Academia Sinica",
        "gbrs_paired_asm": "GCF_018402295.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/402/295/GCA_018402295.1_ASM1840229v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-19",
    "dateModified": "2021-05-19",
    "datePublished": "2021-05-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pontimonas sp."
        ],
        "sample_taxid": [
            "2304492"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Republic of Khakassia, Shirinsky District, Lake Shunet"
        ],
        "sample_host_location_id": [],
        "data_size": "0.254 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 73.58,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "893649",
        "Number of Sequences": "8",
        "Longest Sequences (bp)": "365593",
        "N50 (bp)": "218405",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.6",
        "Number of CDSs": "1106",
        "Average Protein Length": "240.0",
        "Coding Ratio (%)": "89.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 73.58,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018402295.1",
                "gtdb_species": "s__Pontimonas sp018402295",
                "ani": 100.0,
                "matched_fragments": 293,
                "total_fragments": 293,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pontimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018666065.1",
                "gtdb_species": "s__Pontimonas sp018666065",
                "ani": 79.612,
                "matched_fragments": 134,
                "total_fragments": 293,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pontimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001438965.1",
                "gtdb_species": "s__Pontimonas sp001438965",
                "ani": 78.3926,
                "matched_fragments": 65,
                "total_fragments": 293,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pontimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
                "min_intra_species_ani": "99.36",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017857245.1",
                "gtdb_species": "s__Pontimonas sp017857245",
                "ani": 78.0583,
                "matched_fragments": 65,
                "total_fragments": 293,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pontimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.06",
                "min_intra_species_ani": "96.78",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.523,
        "cell_length": 0.176,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 27.5,
        "optimum_ph": 8.0,
        "genome_size": 1760810.0,
        "gc_content": 58.3,
        "coding_genes": 1681.0,
        "rRNA16S_genes": null,
        "tRNA_genes": 46.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Pontimonas",
        "s__Pontimonas sp018402295"
    ],
    "_genome_taxon": [
        "Pontimonas",
        "sp.",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Pontimonas",
        "s__Pontimonas sp018402295",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Microbacteriaceae",
        "Pontimonas",
        "Pontimonas",
        "sp018402295"
    ],
    "_meo": [
        {
            "id": "MEO_0000177",
            "label": "salt lake"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}