{
    "type": "genome",
    "identifier": "GCA_018402765.1",
    "organism": "Vicingaceae bacterium",
    "title": "Vicingaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Academia Sinica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018402765.1",
        "bioproject": "PRJNA721826",
        "biosample": "SAMN19005894",
        "wgs_master": "JAGYIE000000000.1",
        "refseq_category": "na",
        "taxid": "2832346",
        "species_taxid": "2832346",
        "organism_name": "Vicingaceae bacterium",
        "infraspecific_name": "",
        "isolate": "M30B7",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/19",
        "asm_name": "ASM1840276v1",
        "submitter": "Academia Sinica",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/402/765/GCA_018402765.1_ASM1840276v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-19",
    "dateModified": "2021-05-19",
    "datePublished": "2021-05-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Vicingaceae bacterium"
        ],
        "sample_taxid": [
            "2832346"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Republic of Khakassia, Shirinsky District, Lake Shunet"
        ],
        "sample_host_location_id": [],
        "data_size": "0.862 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3098843",
        "Number of Sequences": "16",
        "Longest Sequences (bp)": "997455",
        "N50 (bp)": "994283",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.9",
        "Number of CDSs": "2607",
        "Average Protein Length": "353.5",
        "Coding Ratio (%)": "89.2",
        "Number of rRNAs": "9",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Acidiluteibacter ferrifornacis",
                "strain": "strain=S-15",
                "accession": "GCA_009909615.1",
                "taxid": 2692424,
                "species_taxid": 2692424,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.809,
                "matched_fragments": 273,
                "total_fragments": 1023,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vicingus serpentipes",
                "strain": "strain=NCIMB 15042",
                "accession": "GCA_007993035.1",
                "taxid": 1926625,
                "species_taxid": 1926625,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2406,
                "matched_fragments": 52,
                "total_fragments": 1023,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter atrinae",
                "strain": "strain=KACC 17473",
                "accession": "GCA_001640115.1",
                "taxid": 1333662,
                "species_taxid": 1333662,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8669,
                "matched_fragments": 53,
                "total_fragments": 1023,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018402765.1",
                "gtdb_species": "s__Acidiluteibacter sp018402765",
                "ani": 100.0,
                "matched_fragments": 1021,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__Acidiluteibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_009909615.1",
                "gtdb_species": "s__Acidiluteibacter ferrifornacis",
                "ani": 78.809,
                "matched_fragments": 273,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__Acidiluteibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.97",
                "min_intra_species_ani": "97.97",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002163675.1",
                "gtdb_species": "s__Polaribacter sp002163675",
                "ani": 76.3176,
                "matched_fragments": 52,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007993035.1",
                "gtdb_species": "s__Vicingus serpentipes",
                "ani": 76.2406,
                "matched_fragments": 52,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__Vicingus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905479325.1",
                "gtdb_species": "s__NORP294 sp905479325",
                "ani": 76.0784,
                "matched_fragments": 56,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__NORP294",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905182175.1",
                "gtdb_species": "s__NORP294 sp905182175",
                "ani": 75.9259,
                "matched_fragments": 60,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__NORP294",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016763995.1",
                "gtdb_species": "s__NORP294 sp016763995",
                "ani": 75.8085,
                "matched_fragments": 66,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__NORP294",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002415785.1",
                "gtdb_species": "s__UBA5081 sp002415785",
                "ani": 75.6998,
                "matched_fragments": 62,
                "total_fragments": 1023,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Vicingaceae;g__UBA5081",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Vicingaceae",
        "g__Acidiluteibacter",
        "s__Acidiluteibacter sp018402765"
    ],
    "_genome_taxon": [
        "Vicingaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Vicingaceae",
        "g__Acidiluteibacter",
        "s__Acidiluteibacter sp018402765",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Vicingaceae",
        "Acidiluteibacter",
        "Acidiluteibacter",
        "sp018402765"
    ],
    "_meo": [
        {
            "id": "MEO_0000177",
            "label": "salt lake"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}