{
    "type": "genome",
    "identifier": "GCA_018433885.1",
    "organism": "Candidatus Cloacimonadota bacterium",
    "title": "Candidatus Cloacimonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018433885.1",
        "bioproject": "PRJNA655520",
        "biosample": "SAMN16056150",
        "wgs_master": "JAHDQK000000000.1",
        "refseq_category": "na",
        "taxid": "2030808",
        "species_taxid": "2030808",
        "organism_name": "Candidatus Cloacimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "SM3-B16.2",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/21",
        "asm_name": "SM3",
        "submitter": "University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/433/885/GCA_018433885.1_SM3",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-21",
    "dateModified": "2021-05-21",
    "datePublished": "2021-05-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Cloacimonadota bacterium"
        ],
        "sample_taxid": [
            "2030808"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: San Mateo, CA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.695 MB",
        "sample_ph_range": {
            "min": 7.0,
            "max": 7.0
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2421645",
        "Number of Sequences": "91",
        "Longest Sequences (bp)": "136552",
        "N50 (bp)": "59504",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.8",
        "Number of CDSs": "1890",
        "Average Protein Length": "371.1",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018433885.1",
                "gtdb_species": "s__UBA5456 sp018433885",
                "ani": 100.0,
                "matched_fragments": 752,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.12",
                "min_intra_species_ani": "97.39",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002410505.1",
                "gtdb_species": "s__UBA5456 sp002410505",
                "ani": 79.7919,
                "matched_fragments": 235,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.37",
                "min_intra_species_ani": "99.18",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 14,
                "status": "-"
            },
            {
                "accession": "GCA_002412625.1",
                "gtdb_species": "s__UBA5456 sp002412625",
                "ani": 79.0665,
                "matched_fragments": 299,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017994635.1",
                "gtdb_species": "s__UBA5456 sp017994635",
                "ani": 78.8796,
                "matched_fragments": 130,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012839325.1",
                "gtdb_species": "s__UBA5456 sp012839325",
                "ani": 76.6525,
                "matched_fragments": 66,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002427325.1",
                "gtdb_species": "s__UBA5456 sp002427325",
                "ani": 76.6452,
                "matched_fragments": 75,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA5456",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.98",
                "min_intra_species_ani": "98.98",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002379855.1",
                "gtdb_species": "s__UBA4175 sp002379855",
                "ani": 76.284,
                "matched_fragments": 54,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA4175",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.94",
                "min_intra_species_ani": "98.94",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002391675.1",
                "gtdb_species": "s__UBA3900 sp002391675",
                "ani": 76.0784,
                "matched_fragments": 55,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Cloacimonadota;c__Cloacimonadia;o__Cloacimonadales;f__Cloacimonadaceae;g__UBA3900",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "98.12",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cloacimonadota",
        "c__Cloacimonadia",
        "o__Cloacimonadales",
        "f__Cloacimonadaceae",
        "g__UBA5456",
        "s__UBA5456 sp018433885"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Cloacimonadota",
        "bacterium",
        "d__Bacteria",
        "p__Cloacimonadota",
        "c__Cloacimonadia",
        "o__Cloacimonadales",
        "f__Cloacimonadaceae",
        "g__UBA5456",
        "s__UBA5456 sp018433885",
        "Bacteria",
        "Cloacimonadota",
        "Cloacimonadia",
        "Cloacimonadales",
        "Cloacimonadaceae",
        "UBA5456",
        "UBA5456",
        "sp018433885"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        },
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}