{
    "type": "genome",
    "identifier": "GCA_018435755.1",
    "organism": "Anaerolineaceae bacterium",
    "title": "Anaerolineaceae bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018435755.1",
        "bioproject": "PRJNA655520",
        "biosample": "SAMN16056058",
        "wgs_master": "JAHDMY000000000.1",
        "refseq_category": "na",
        "taxid": "2024896",
        "species_taxid": "2024896",
        "organism_name": "Anaerolineaceae bacterium",
        "infraspecific_name": "",
        "isolate": "R3-B31",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/21",
        "asm_name": "R3",
        "submitter": "University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/435/755/GCA_018435755.1_R3",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-21",
    "dateModified": "2021-05-21",
    "datePublished": "2021-05-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerolineaceae bacterium"
        ],
        "sample_taxid": [
            "2024896"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Richmond, CA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.335 MB",
        "sample_ph_range": {
            "min": 7.0,
            "max": 7.0
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 72.92,
        "contamination": 6.29,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1143587",
        "Number of Sequences": "519",
        "Longest Sequences (bp)": "42267",
        "N50 (bp)": "2391",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.1",
        "Number of CDSs": "680",
        "Average Protein Length": "258.3",
        "Coding Ratio (%)": "46.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 72.92,
            "contamination": 6.29,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_012839565.1",
                "gtdb_species": "s__T78 sp012839565",
                "ani": 96.5708,
                "matched_fragments": 105,
                "total_fragments": 110,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__T78",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_012800995.1",
                "gtdb_species": "s__T78 sp012800995",
                "ani": 83.1896,
                "matched_fragments": 51,
                "total_fragments": 110,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__T78",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.458,
        "cell_length": null,
        "doubling_h": 1.6,
        "growth_tmp": 43.216,
        "optimum_tmp": 41.833,
        "optimum_ph": 7.107,
        "genome_size": 3574185.833,
        "gc_content": 52.066,
        "coding_genes": 2633.5,
        "rRNA16S_genes": 1.666,
        "tRNA_genes": 47.666,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.9,
        "aerobic_respiration": 0.1,
        "mesophilic_range_tmp": 0.714,
        "thermophilic_range_tmp": 0.285,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 1.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__Anaerolineaceae",
        "g__T78",
        "s__T78 sp012839565"
    ],
    "_genome_taxon": [
        "Anaerolineaceae",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__Anaerolineaceae",
        "g__T78",
        "s__T78 sp012839565",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Anaerolineales",
        "Anaerolineaceae",
        "T78",
        "T78",
        "sp012839565"
    ],
    "_meo": [
        {
            "id": "MEO_0000035",
            "label": "waste water"
        },
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}