{
    "type": "genome",
    "identifier": "GCA_018609935.1",
    "organism": "Halobacteriales archaeon",
    "title": "Halobacteriales archaeon",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Utah",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018609935.1",
        "bioproject": "PRJNA522308",
        "biosample": "SAMN19270115",
        "wgs_master": "JAHENH000000000.1",
        "refseq_category": "na",
        "taxid": "1904752",
        "species_taxid": "1904752",
        "organism_name": "Halobacteriales archaeon",
        "infraspecific_name": "",
        "isolate": "BinSanityLC-kmean-bin_57-bin_0-refined_5",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/01",
        "asm_name": "ASM1860993v1",
        "submitter": "University of Utah",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/609/935/GCA_018609935.1_ASM1860993v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-01",
    "dateModified": "2021-06-01",
    "datePublished": "2021-06-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Halobacteriales archaeon"
        ],
        "sample_taxid": [
            "1904752"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Utah Bonneville Salt Flats"
        ],
        "sample_host_location_id": [],
        "data_size": "0.632 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 93.75,
        "contamination": 8.1,
        "strain_heterogeneity": 37.5,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2259503",
        "Number of Sequences": "175",
        "Longest Sequences (bp)": "79448",
        "N50 (bp)": "19775",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "32.5",
        "Number of CDSs": "2245",
        "Average Protein Length": "245.1",
        "Coding Ratio (%)": "73.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 93.75,
            "contamination": 8.1,
            "strain_heterogeneity": 37.5
        },
        "gtdb_result": [
            {
                "accession": "GCA_018609935.1",
                "gtdb_species": "s__JAHENH01 sp018609935",
                "ani": 100.0,
                "matched_fragments": 673,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__JAHENH01;f__JAHENH01;g__JAHENH01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.08,
        "cell_length": 0.162,
        "doubling_h": 0.921,
        "growth_tmp": 38.072,
        "optimum_tmp": 39.519,
        "optimum_ph": 6.881,
        "genome_size": 3619346.25,
        "gc_content": 62.468,
        "coding_genes": 3001.894,
        "rRNA16S_genes": 1.726,
        "tRNA_genes": 47.217,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.322,
        "range_salinity": 1.0,
        "facultative_respiration": 0.039,
        "anaerobic_respiration": 0.196,
        "aerobic_respiration": 0.764,
        "mesophilic_range_tmp": 0.909,
        "thermophilic_range_tmp": 0.09,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.571,
        "coccus_cell_shape": 0.333,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.095,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Halobacteriota",
        "c__Halobacteria",
        "o__Halorutilales",
        "f__JAHENH01",
        "g__JAHENH01",
        "s__JAHENH01 sp018609935"
    ],
    "_genome_taxon": [
        "Halobacteriales",
        "archaeon",
        "d__Archaea",
        "p__Halobacteriota",
        "c__Halobacteria",
        "o__Halorutilales",
        "f__JAHENH01",
        "g__JAHENH01",
        "s__JAHENH01 sp018609935",
        "Archaea",
        "Halobacteriota",
        "Halobacteria",
        "Halorutilales",
        "JAHENH01",
        "JAHENH01",
        "JAHENH01",
        "sp018609935"
    ],
    "_meo": [
        {
            "id": "MEO_0000066",
            "label": "sediment"
        },
        {
            "id": "MEO_0000722",
            "label": "salt"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}