{
    "type": "genome",
    "identifier": "GCA_018623095.1",
    "organism": "Marinobacterium sp.",
    "title": "Marinobacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Tehran",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018623095.1",
        "bioproject": "PRJNA575141",
        "biosample": "SAMN14400453",
        "wgs_master": "JAAZVX000000000.1",
        "refseq_category": "na",
        "taxid": "1902815",
        "species_taxid": "1902815",
        "organism_name": "Marinobacterium sp.",
        "infraspecific_name": "",
        "isolate": "KhW_metabat.4",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/02",
        "asm_name": "ASM1862309v1",
        "submitter": "University of Tehran",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/623/095/GCA_018623095.1_ASM1862309v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-02",
    "dateModified": "2021-06-02",
    "datePublished": "2021-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Marinobacterium sp."
        ],
        "sample_taxid": [
            "1902815"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Iran: Persian Gulf, Khark"
        ],
        "sample_host_location_id": [],
        "data_size": "0.447 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 62.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1548494",
        "Number of Sequences": "148",
        "Longest Sequences (bp)": "102319",
        "N50 (bp)": "15332",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.4",
        "Number of CDSs": "1402",
        "Average Protein Length": "304.1",
        "Coding Ratio (%)": "82.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 62.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018623095.1",
                "gtdb_species": "s__Marinobacterium sp018623095",
                "ani": 100.0,
                "matched_fragments": 440,
                "total_fragments": 443,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_013283365.1",
                "gtdb_species": "s__Marinobacterium sp013283365",
                "ani": 85.6841,
                "matched_fragments": 394,
                "total_fragments": 443,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.13",
                "min_intra_species_ani": "97.87",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 16,
                "status": "-"
            },
            {
                "accession": "GCF_012848475.1",
                "gtdb_species": "s__Marinobacterium sp012848475",
                "ani": 78.8815,
                "matched_fragments": 156,
                "total_fragments": 443,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013373575.1",
                "gtdb_species": "s__Marinobacterium sp013373575",
                "ani": 77.1349,
                "matched_fragments": 71,
                "total_fragments": 443,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.238,
        "cell_length": 0.19,
        "doubling_h": null,
        "growth_tmp": 26.687,
        "optimum_tmp": 30.407,
        "optimum_ph": 7.541,
        "genome_size": 4628608.516,
        "gc_content": 58.65,
        "coding_genes": 4429.0,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 83.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.083,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.916,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Nitrincolaceae",
        "g__Marinobacterium_E",
        "s__Marinobacterium_E sp018623095"
    ],
    "_genome_taxon": [
        "Marinobacterium",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Nitrincolaceae",
        "g__Marinobacterium_E",
        "s__Marinobacterium_E sp018623095",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Nitrincolaceae",
        "Marinobacterium",
        "E",
        "Marinobacterium",
        "E",
        "sp018623095"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}